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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG1153-RA through 18771 annotations produced 1 hits



Osiris (Osi7):

Annotation Number : CG1153
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037414
Gbrowse : chr3R:2074713-2075795 (+) // 100.0 //
Probeset : 1636325_at
Accessions : protein= NP_649626;, nucleotide= NM_141369;
FlyMine data for FBgn0037414.
BDGP gene expression has embryonic in situ data for CG1153: 12 pix of staining in 4 body parts.
VDRC has 3 RNAi stocks for FBgn0037414 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.10None
Head3 ± 00 of 4 0.30None
Eye1 ± 00 of 4 0.10None
Thoracicoabdominal ganglion1 ± 00 of 4 0.10None
Salivary gland4 ± 10 of 4 0.38None
Crop2 ± 00 of 4 0.20None
Midgut2 ± 00 of 4 0.20None
Tubule2 ± 00 of 4 0.20Down
Hindgut1 ± 00 of 4 0.20None
Heart1 ± 00 of 4 0.15None
Fat body4 ± 10 of 4 0.36None
Ovary3 ± 00 of 4 0.30None
Testis2 ± 00 of 4 0.20None
Male accessory glands1 ± 00 of 4 0.10None
Virgin spermatheca2 ± 00 of 4 0.17None
Mated spermatheca1 ± 00 of 4 0.14None
Adult carcass2 ± 00 of 4 0.30None
Larval CNS1 ± 00 of 4 0.11None
Larval Salivary gland3 ± 10 of 4 0.29None
Larval midgut4 ± 20 of 4 0.41None
Larval tubule2 ± 00 of 4 0.20None
Larval hindgut2 ± 00 of 4 0.20None
Larval fat body8 ± 40 of 4 0.70None
Larval trachea5 ± 30 of 4 0.52None
Larval carcass9 ± 10 of 4 0.82None
S2 cells (growing)4 ± 10 of 4 0.43None
Whole fly11 ± 51 of 4

Looking for CG1153-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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