Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG11577-RA through 18771 annotations produced 1 hits



(CG11577):

Annotation Number : CG11577
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036847
Gbrowse : chr3L:19087988-19089326 (-) // 100.0 //
Probeset : 1637571_at
Accessions : protein= NP_649089;, nucleotide= NM_140832;
FlyMine data for FBgn0036847.
BDGP gene expression has embryonic in situ data for CG11577: 4 pix of staining in 1 body parts.
BioGrid reports that CG11577 interacts with CG17549 Dmel CG34110 .
VDRC has 3 RNAi stocks for FBgn0036847 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain212 ± 54 of 4 1.10None
Head184 ± 104 of 4 1.00None
Eye267 ± 124 of 4 1.39Up
Thoracicoabdominal ganglion208 ± 84 of 4 1.10None
Salivary gland174 ± 104 of 4 0.91None
Crop95 ± 54 of 4 0.50Down
Midgut140 ± 64 of 4 0.70Down
Tubule53 ± 54 of 4 0.30Down
Hindgut86 ± 14 of 4 0.40Down
Heart223 ± 44 of 4 1.16None
Fat body162 ± 34 of 4 0.84None
Ovary280 ± 84 of 4 1.50Up
Testis21 ± 24 of 4 0.10Down
Male accessory glands457 ± 224 of 4 2.40Up
Virgin spermatheca189 ± 64 of 4 0.98None
Mated spermatheca200 ± 144 of 4 1.04None
Adult carcass99 ± 64 of 4 0.50Down
Larval CNS339 ± 474 of 4 1.76Up
Larval Salivary gland697 ± 184 of 4 3.61Up
Larval midgut140 ± 24 of 4 0.73Down
Larval tubule141 ± 64 of 4 0.70Down
Larval hindgut140 ± 94 of 4 0.73Down
Larval fat body133 ± 244 of 4 0.70None
Larval trachea291 ± 514 of 4 1.51Up
Larval carcass114 ± 64 of 4 0.59Down
S2 cells (growing)720 ± 144 of 4 3.73Up
Whole fly193 ± 154 of 4

Looking for CG11577-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime