FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11589-RA through 18771 annotations produced 1 hits

VhaM9.7-1 (VhaM9.7-c):

Annotation Number : CG11589
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028664
Gbrowse : chr3L:4186017-4186816 (-) // 100.0 //
Probeset : 1639067_at
Accessions : protein= NP_647868;, nucleotide= NM_139611;
Pathway : "0000220 // vacuolar proton-transporting V-type ATPase
Interpro : V0 domain // inferred from sequence or structural similarity /// 0033179 // proton-transporting V-type ATPase
FlyMine data for FBgn0028664.
BDGP gene expression has embryonic in situ data for VhaM9.7-1: 4 pix of staining in 1 body parts.
BioGrid reports that CG11589 interacts with CG8111 .
TRiP has 1 RNAi stocks for FBgn0028664 available for purchase.
VDRC has 2 RNAi stocks for FBgn0028664 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	72 ± 0	4 of 4	0.40	Down
Head	182 ± 8	4 of 4	1.00	None
Eye	297 ± 9	4 of 4	1.67	Up
Thoracicoabdominal ganglion	81 ± 2	4 of 4	0.50	Down
Salivary gland	441 ± 18	4 of 4	2.48	Up
Crop	320 ± 9	4 of 4	1.80	Up
Midgut	175 ± 2	4 of 4	1.00	None
Tubule	459 ± 13	4 of 4	2.60	Up
Hindgut	191 ± 8	4 of 4	1.10	None
Heart	564 ± 24	4 of 4	3.17	Up
Fat body	207 ± 3	4 of 4	1.17	Up
Ovary	267 ± 2	4 of 4	1.50	Up
Testis	52 ± 1	4 of 4	0.30	Down
Male accessory glands	196 ± 3	4 of 4	1.10	None
Virgin spermatheca	265 ± 10	4 of 4	1.49	Up
Mated spermatheca	288 ± 16	4 of 4	1.62	Up
Adult carcass	207 ± 10	4 of 4	1.20	None
Larval CNS	59 ± 2	4 of 4	0.34	Down
Larval Salivary gland	327 ± 11	4 of 4	1.84	Up
Larval midgut	183 ± 6	4 of 4	1.03	None
Larval tubule	416 ± 6	4 of 4	2.30	Up
Larval hindgut	165 ± 8	4 of 4	0.93	None
Larval fat body	215 ± 19	4 of 4	1.20	None
Larval trachea	205 ± 25	4 of 4	1.15	None
Larval carcass	224 ± 8	4 of 4	1.26	Up
S2 cells (growing)	251 ± 1	4 of 4	1.41	Up
Whole fly	178 ± 9	4 of 4

Looking for CG11589-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720