FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11639-RA through 18771 annotations produced 1 hits

TfIIA-S-2 (TfIIA-S-2):

Annotation Number : CG11639
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040338
Gbrowse : chrX:905133-905676 (-) // 100.0 //
Probeset : 1634959_at
Accessions : protein= NP_569877;, nucleotide= NM_130521;
Pathway : 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0
Interpro : 0003702 // RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0005515 // protein
FlyMine data for FBgn0040338.
BioGrid reports that CG11639 interacts with CG5930 .
TRiP has 1 RNAi stocks for FBgn0040338 available for purchase.
VDRC has 3 RNAi stocks for FBgn0040338 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 1	0 of 4	0.20	Down
Head	0 ± 0	0 of 4	0.10	Down
Eye	2 ± 1	0 of 4	0.42	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.30	Down
Salivary gland	6 ± 2	0 of 4	0.95	None
Crop	3 ± 1	0 of 4	0.50	None
Midgut	2 ± 0	0 of 4	0.40	Down
Tubule	1 ± 0	0 of 4	0.30	Down
Hindgut	2 ± 0	0 of 4	0.30	Down
Heart	3 ± 1	0 of 4	0.47	None
Fat body	2 ± 1	0 of 4	0.34	Down
Ovary	1 ± 0	0 of 4	0.20	Down
Testis	65 ± 6	4 of 4	9.90	Up
Male accessory glands	2 ± 1	0 of 4	0.40	None
Virgin spermatheca	3 ± 1	0 of 4	0.46	None
Mated spermatheca	0 ± 0	0 of 4	0.10	Down
Adult carcass	1 ± 0	0 of 4	0.20	Down
Larval CNS	2 ± 1	0 of 4	0.39	Down
Larval Salivary gland	1 ± 0	0 of 4	0.23	Down
Larval midgut	0 ± 0	0 of 4	0.09	Down
Larval tubule	0 ± 0	0 of 4	0.10	Down
Larval hindgut	1 ± 0	0 of 4	0.15	Down
Larval fat body	19 ± 6	3 of 4	2.90	None
Larval trachea	3 ± 2	0 of 4	0.54	None
Larval carcass	2 ± 0	0 of 4	0.33	Down
S2 cells (growing)	23 ± 2	4 of 4	3.55	Up
Whole fly	6 ± 1	2 of 4

Looking for CG11639-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720