Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG11784-RA through 18771 annotations produced 1 hits



(CG11784):

Annotation Number : CG11784
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033381
Gbrowse : chr2R:5009797-5010814 (+) // 100.0 //
Probeset : 1632979_at
Accessions : protein= NP_610457;, nucleotide= NM_136613;
Interpro : 0004364 // glutathione transferase activity // inferred from sequence or structural similarity /// 0004364 // glutathion
FlyMine data for FBgn0033381.
BDGP gene expression has embryonic in situ data for CG11784: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0033381 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain222 34 of 4 1.10None
Head149 44 of 4 0.70Down
Eye142 64 of 4 0.70Down
Thoracicoabdominal ganglion324 84 of 4 1.60Up
Salivary gland509 324 of 4 2.50Up
Crop117 44 of 4 0.60Down
Midgut223 84 of 4 1.10None
Tubule216 74 of 4 1.10None
Hindgut178 94 of 4 0.90None
Heart263 154 of 4 1.29Up
Fat body294 164 of 4 1.44Up
Ovary261 74 of 4 1.30Up
Testis25 04 of 4 0.10Down
Male accessory glands409 364 of 4 2.00Up
Virgin spermatheca146 74 of 4 0.72Down
Mated spermatheca218 64 of 4 1.07None
Adult carcass269 34 of 4 1.30Up
Larval CNS327 114 of 4 1.61Up
Larval Salivary gland500 114 of 4 2.45Up
Larval midgut243 54 of 4 1.19None
Larval tubule283 64 of 4 1.40Up
Larval hindgut244 84 of 4 1.20None
Larval fat body142 184 of 4 0.70None
Larval trachea451 644 of 4 2.21Up
Larval carcass270 174 of 4 1.32Up
S2 cells (growing)284 124 of 4 1.39Up
Whole fly204 174 of 4

Looking for CG11784-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime