FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11804-RB through 18771 annotations produced 1 hits

ced-6 (ced-6):

Annotation Number : CG11804
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029092
Gbrowse : chr2R:5322173-5329065 (-) // 100.0 //
Probeset : 1638738_s_at
Accessions : protein= NP_610488; /// NP_724789; /// NP_724790;, nucleotide= NM_136644; /// NM_165675; /// NM_165676;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0029092.
BDGP gene expression has embryonic in situ data for ced-6: 16 pix of staining in 3 body parts.
Homophila reports that CG11804 is a close match (1e-12) to human gene ARH;FHCB1;FHCB2;LDLRAP1 (NP_056442), a gene associated with Hypercholesterolemia, familial, autosomal recessive, 603813 (3).
BioGrid reports that CG11804 interacts with CG6290 .
VDRC has 2 RNAi stocks for FBgn0029092 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	619 ± 28	4 of 4	0.90	None
Head	1116 ± 69	4 of 4	1.60	Up
Eye	644 ± 16	4 of 4	0.95	None
Thoracicoabdominal ganglion	561 ± 13	4 of 4	0.80	Down
Salivary gland	511 ± 33	4 of 4	0.75	Down
Crop	895 ± 19	4 of 4	1.30	Up
Midgut	24 ± 0	4 of 4	0.00	Down
Tubule	438 ± 60	4 of 4	0.60	Down
Hindgut	1024 ± 3	4 of 4	1.50	Up
Heart	2326 ± 48	4 of 4	3.42	Up
Fat body	1435 ± 82	4 of 4	2.11	Up
Ovary	952 ± 14	4 of 4	1.40	Up
Testis	97 ± 9	4 of 4	0.10	Down
Male accessory glands	196 ± 4	4 of 4	0.30	Down
Virgin spermatheca	1240 ± 108	4 of 4	1.82	Up
Mated spermatheca	1202 ± 95	4 of 4	1.77	Up
Adult carcass	988 ± 45	4 of 4	1.50	Up
Larval CNS	159 ± 21	4 of 4	0.23	Down
Larval Salivary gland	136 ± 8	4 of 4	0.20	Down
Larval midgut	256 ± 75	4 of 4	0.38	Down
Larval tubule	1495 ± 46	4 of 4	2.20	Up
Larval hindgut	346 ± 36	4 of 4	0.51	Down
Larval fat body	2749 ± 251	4 of 4	4.00	Up
Larval trachea	569 ± 161	4 of 4	0.84	None
Larval carcass	612 ± 94	4 of 4	0.90	None
S2 cells (growing)	984 ± 57	4 of 4	1.45	Up
Whole fly	679 ± 22	4 of 4

Looking for CG11804-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720