FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11849-RA through 18771 annotations produced 1 hits

Tintin (dan):

Annotation Number : CG11849
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039286
Gbrowse : chr3R:21010734-21018530 (+) // 100.0 //
Probeset : 1639221_at
Accessions : protein= NP_651346;, nucleotide= NM_143089;
Pathway : "0000775 // chromosome
Interpro : centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005
FlyMine data for FBgn0039286.
BDGP gene expression has embryonic in situ data for CG11849: 49 pix of staining in 16 body parts.
BioGrid reports that CG11849 interacts with CG18591 CG6993 .
VDRC has 2 RNAi stocks for FBgn0039286 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	67 ± 1	4 of 4	10.40	Up
Head	17 ± 1	4 of 4	2.70	Up
Eye	17 ± 1	3 of 4	2.72	Up
Thoracicoabdominal ganglion	53 ± 2	4 of 4	8.30	Up
Salivary gland	15 ± 2	0 of 4	2.39	Up
Crop	6 ± 0	0 of 4	1.10	None
Midgut	4 ± 1	0 of 4	0.70	None
Tubule	5 ± 0	0 of 4	0.80	None
Hindgut	4 ± 1	0 of 4	0.70	None
Heart	2 ± 1	0 of 4	0.43	None
Fat body	7 ± 4	1 of 4	1.18	None
Ovary	1 ± 0	0 of 4	0.20	Down
Testis	2 ± 0	0 of 4	0.40	None
Male accessory glands	4 ± 2	0 of 4	0.70	None
Virgin spermatheca	8 ± 2	0 of 4	1.29	None
Mated spermatheca	9 ± 0	0 of 4	1.41	None
Adult carcass	5 ± 2	0 of 4	0.80	None
Larval CNS	117 ± 12	4 of 4	17.94	Up
Larval Salivary gland	9 ± 2	0 of 4	1.41	None
Larval midgut	4 ± 1	0 of 4	0.62	None
Larval tubule	4 ± 1	0 of 4	0.70	None
Larval hindgut	4 ± 0	0 of 4	0.67	None
Larval fat body	4 ± 2	0 of 4	0.70	None
Larval trachea	4 ± 1	0 of 4	0.68	None
Larval carcass	4 ± 1	0 of 4	0.67	None
S2 cells (growing)	1 ± 0	0 of 4	0.28	Down
Whole fly	6 ± 1	2 of 4

Looking for CG11849-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720