FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11853-RA through 18771 annotations produced 1 hits

Takeout (to):

Annotation Number : CG11853
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039298
Gbrowse : chr3R:21065901-21067175 (+) // 100.0 //
Probeset : 1635636_at
Accessions : protein= NP_524497;, nucleotide= NM_079773;
Pathway : 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from elect
FlyMine data for FBgn0039298.
BDGP gene expression has embryonic in situ data for to: 4 pix of staining in 1 body parts.
BioGrid reports that CG11853 interacts with CG14307 .
VDRC has 3 RNAi stocks for FBgn0039298 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	38 ± 9	4 of 4	0.20	Down
Head	887 ± 61	4 of 4	4.60	Up
Eye	581 ± 259	4 of 4	3.00	None
Thoracicoabdominal ganglion	39 ± 6	3 of 4	0.20	Down
Salivary gland	16 ± 4	0 of 4	0.08	Down
Crop	972 ± 53	4 of 4	5.00	Up
Midgut	810 ± 22	4 of 4	4.20	Up
Tubule	18 ± 8	1 of 4	0.10	Down
Hindgut	1297 ± 11	4 of 4	6.70	Up
Heart	29 ± 13	4 of 4	0.15	Down
Fat body	9 ± 3	2 of 4	0.05	Down
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	5 ± 1	3 of 4	0.00	Down
Male accessory glands	13 ± 0	0 of 4	0.10	Down
Virgin spermatheca	5 ± 1	0 of 4	0.03	Down
Mated spermatheca	4 ± 2	0 of 4	0.02	Down
Adult carcass	200 ± 50	4 of 4	1.00	None
Larval CNS	1 ± 0	0 of 4	0.01	Down
Larval Salivary gland	6 ± 3	1 of 4	0.03	Down
Larval midgut	5 ± 1	0 of 4	0.03	Down
Larval tubule	5 ± 0	0 of 4	0.00	Down
Larval hindgut	254 ± 62	4 of 4	1.31	None
Larval fat body	4 ± 1	0 of 4	0.00	Down
Larval trachea	1044 ± 120	4 of 4	5.39	Up
Larval carcass	11 ± 1	1 of 4	0.06	Down
S2 cells (growing)	3 ± 0	0 of 4	0.02	Down
Whole fly	193 ± 32	4 of 4

Looking for CG11853-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720