FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11949-RC through 18771 annotations produced 1 hits

Coracle (cora):

Annotation Number : CG11949
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010434
Gbrowse : chr2R:15116569-15131256 (+) // 100.0 //
Probeset : 1627454_a_at
Accessions : protein= NP_523791; /// NP_725864; /// NP_725865; /// NP_725866;, nucleotide= NM_079067; /// NM_166336; /// NM_166337; /// NM_166338;
Pathway : open tracheal system // inferred from mutant phenotype /// 0035321 // maintenance of imaginal disc-derived wing hair or
Interpro : 0005856 // cytoskeleton // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from
FlyMine data for FBgn0010434.
BDGP gene expression has embryonic in situ data for cora: 14 pix of staining in 16 body parts.
Homophila reports that CG11949 is a close match (5e-11) to human gene NF2 (NP_861971), a gene associated with Meningioma, NF2-related, somatic, 607174 (3);Neurofibromatosis, type 2, 101000 (3);Schwannomatosis, 162091 (3).
BioGrid reports that CG11949 interacts with CG9636 CG10079 CG10079 .
TRiP has 2 RNAi stocks for FBgn0010434 available for purchase.
VDRC has 3 RNAi stocks for FBgn0010434 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	583 ± 4	4 of 4	4.10	Up
Head	348 ± 14	4 of 4	2.50	Up
Eye	207 ± 7	4 of 4	1.46	Up
Thoracicoabdominal ganglion	565 ± 19	4 of 4	4.00	Up
Salivary gland	215 ± 9	4 of 4	1.52	Up
Crop	534 ± 37	4 of 4	3.80	Up
Midgut	211 ± 8	4 of 4	1.50	Up
Tubule	54 ± 2	4 of 4	0.40	Down
Hindgut	300 ± 3	4 of 4	2.10	Up
Heart	265 ± 17	4 of 4	1.88	Up
Fat body	79 ± 12	4 of 4	0.56	Down
Ovary	54 ± 1	4 of 4	0.40	Down
Testis	51 ± 4	4 of 4	0.40	Down
Male accessory glands	237 ± 9	4 of 4	1.70	Up
Virgin spermatheca	65 ± 4	4 of 4	0.46	Down
Mated spermatheca	106 ± 18	4 of 4	0.75	None
Adult carcass	339 ± 35	4 of 4	2.40	Up
Larval CNS	583 ± 37	4 of 4	4.12	Up
Larval Salivary gland	347 ± 33	4 of 4	2.45	Up
Larval midgut	317 ± 9	4 of 4	2.24	Up
Larval tubule	79 ± 4	4 of 4	0.60	Down
Larval hindgut	487 ± 17	4 of 4	3.44	Up
Larval fat body	86 ± 3	4 of 4	0.60	Down
Larval trachea	546 ± 27	4 of 4	3.86	Up
Larval carcass	391 ± 16	4 of 4	2.76	Up
S2 cells (growing)	800 ± 11	4 of 4	5.65	Up
Whole fly	141 ± 14	4 of 4

Looking for CG11949-RC. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720