FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11958-RA through 18771 annotations produced 1 hits

calnexin (Cnx99A):

Annotation Number : CG11958
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0015622
Gbrowse : chr3R:25140972-25145366 (-) // 100.0 //
Probeset : 1627261_s_at
Accessions : protein= NP_001036766; /// NP_001036767; /// NP_477157; /// NP_733286;, nucleotide= NM_001043301; /// NM_001043302; /// NM_057809; /// NM_170407;
Pathway : 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum
Interpro : 0005509 // calcium ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferre
FlyMine data for FBgn0015622.
BioGrid reports that CG11958 interacts with CG13030 .
TRiP has 1 RNAi stocks for FBgn0015622 available for purchase.
VDRC has 3 RNAi stocks for FBgn0015622 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	604 ± 19	4 of 4	1.20	Up
Head	852 ± 62	4 of 4	1.60	Up
Eye	1495 ± 153	4 of 4	2.89	Up
Thoracicoabdominal ganglion	767 ± 14	4 of 4	1.50	Up
Salivary gland	1401 ± 74	4 of 4	2.71	Up
Crop	485 ± 11	4 of 4	0.90	None
Midgut	841 ± 30	4 of 4	1.60	Up
Tubule	590 ± 27	4 of 4	1.10	Up
Hindgut	543 ± 9	4 of 4	1.10	None
Heart	568 ± 9	4 of 4	1.10	Up
Fat body	838 ± 51	4 of 4	1.62	Up
Ovary	683 ± 20	4 of 4	1.30	Up
Testis	1085 ± 21	4 of 4	2.10	Up
Male accessory glands	2675 ± 38	4 of 4	5.20	Up
Virgin spermatheca	790 ± 53	4 of 4	1.53	Up
Mated spermatheca	779 ± 17	4 of 4	1.51	Up
Adult carcass	506 ± 11	4 of 4	1.00	None
Larval CNS	1010 ± 62	4 of 4	1.95	Up
Larval Salivary gland	2552 ± 34	4 of 4	4.93	Up
Larval midgut	1320 ± 83	4 of 4	2.55	Up
Larval tubule	1375 ± 43	4 of 4	2.70	Up
Larval hindgut	832 ± 28	4 of 4	1.61	Up
Larval fat body	899 ± 57	4 of 4	1.70	Up
Larval trachea	417 ± 76	4 of 4	0.81	None
Larval carcass	761 ± 34	4 of 4	1.47	Up
S2 cells (growing)	1724 ± 25	4 of 4	3.33	Up
Whole fly	517 ± 10	4 of 4

Looking for CG11958-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720