FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11963-RA through 18771 annotations produced 1 hits

CG11963 (skap):

Annotation Number : CG11963
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037643
Gbrowse : chr3R:4764404-4768750 (+) // 100.0 //
Probeset : 1630433_at
Accessions : protein= NP_001097713; /// NP_001163558; /// NP_001163559; /// NP_649846;, nucleotide= NM_001104243; /// NM_001170087; /// NM_001170088; /// NM_141589;
Pathway : 0005813 // centrosome // inferred from direct assay /// 0005875 // microtubule associated complex // inferred from direc
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004775 // succinate-CoA ligase (ADP-forming) a
FlyMine data for FBgn0037643.
Homophila reports that CG11963 is a close match (3e-138) to human gene SUCLA2 (NP_003841), a gene associated with Mitochondrial DNA depletion syndrome, enceophalomyopathic form, with methylmalonic aciduria, 612073 (3).
BioGrid reports that CG11963 interacts with CG13549 .
VDRC has 4 RNAi stocks for FBgn0037643 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	882 ± 19	4 of 4	1.00	None
Head	1464 ± 34	4 of 4	1.70	Up
Eye	861 ± 23	4 of 4	0.98	None
Thoracicoabdominal ganglion	798 ± 20	4 of 4	0.90	None
Salivary gland	1420 ± 45	4 of 4	1.62	Up
Crop	874 ± 26	4 of 4	1.00	None
Midgut	596 ± 15	4 of 4	0.70	Down
Tubule	881 ± 38	4 of 4	1.00	None
Hindgut	1768 ± 33	4 of 4	2.00	Up
Heart	1992 ± 131	4 of 4	2.27	Up
Fat body	2161 ± 204	4 of 4	2.47	Up
Ovary	361 ± 11	4 of 4	0.40	Down
Testis	1727 ± 51	4 of 4	2.00	Up
Male accessory glands	212 ± 11	4 of 4	0.20	Down
Virgin spermatheca	1688 ± 82	4 of 4	1.93	Up
Mated spermatheca	1319 ± 130	4 of 4	1.51	Up
Adult carcass	1650 ± 108	4 of 4	1.90	Up
Larval CNS	441 ± 46	4 of 4	0.50	Down
Larval Salivary gland	623 ± 30	4 of 4	0.71	Down
Larval midgut	371 ± 14	4 of 4	0.42	Down
Larval tubule	502 ± 28	4 of 4	0.60	Down
Larval hindgut	1022 ± 38	4 of 4	1.17	None
Larval fat body	680 ± 31	4 of 4	0.80	None
Larval trachea	606 ± 36	4 of 4	0.69	Down
Larval carcass	970 ± 29	4 of 4	1.11	None
S2 cells (growing)	616 ± 23	4 of 4	0.70	Down
Whole fly	876 ± 77	4 of 4

Looking for CG11963-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720