FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG12047-RC through 18771 annotations produced 2 hits

mushroom body defect (mud):

Annotation Number : CG12047
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002873
Gbrowse : chrX:14141875-14149287 (+) // 99.97 //
Probeset : 1626073_a_at
Accessions : protein= NP_536743; /// NP_727769; /// NP_727770;, nucleotide= NM_080495; /// NM_167399; /// NM_167400;
Pathway : DNA-dependent // inferred from electronic annotation /// 0006801 // superoxide metabolic process // inferred from elect
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 00
FlyMine data for FBgn0002873.
Homophila reports that CG12047 is a close match (7e-11) to human gene DSP;KPPS2;PPKS2 (NP_004406), a gene associated with Arrhythmogenic right ventricular dysplasia 8, 607450 (3);Dilated cardiomyopathy with woolly hair and keratoderma, 605676 (3);Epidermolysis bullosa, lethal acantholytic, 609638 (3);Keratosis palmoplantaris striata II (3);Skin fragility-woolly hair syndrome, 607655 (3).
BioGrid reports that CG12047 interacts with CG13138 CG4832 CG5692 .
TRiP has 3 RNAi stocks for FBgn0002873 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.00	Down
Head	2 ± 0	0 of 4	0.10	Down
Eye	2 ± 0	0 of 4	0.11	Down
Thoracicoabdominal ganglion	3 ± 0	0 of 4	0.10	Down
Salivary gland	3 ± 2	0 of 4	0.15	Down
Crop	5 ± 0	1 of 4	0.30	Down
Midgut	2 ± 0	0 of 4	0.10	Down
Tubule	2 ± 0	0 of 4	0.10	Down
Hindgut	4 ± 1	0 of 4	0.20	Down
Heart	1 ± 0	0 of 4	0.06	Down
Fat body	3 ± 1	0 of 4	0.17	Down
Ovary	33 ± 2	4 of 4	1.60	Up
Testis	264 ± 6	4 of 4	12.90	Up
Male accessory glands	8 ± 2	2 of 4	0.40	Down
Virgin spermatheca	2 ± 1	0 of 4	0.12	Down
Mated spermatheca	1 ± 0	0 of 4	0.07	Down
Adult carcass	5 ± 2	0 of 4	0.30	Down
Larval CNS	33 ± 2	4 of 4	1.64	Up
Larval Salivary gland	1 ± 0	0 of 4	0.08	Down
Larval midgut	5 ± 0	2 of 4	0.27	Down
Larval tubule	2 ± 0	0 of 4	0.10	Down
Larval hindgut	5 ± 0	2 of 4	0.25	Down
Larval fat body	38 ± 17	4 of 4	1.90	None
Larval trachea	6 ± 2	4 of 4	0.33	Down
Larval carcass	3 ± 1	1 of 4	0.17	Down
S2 cells (growing)	62 ± 7	4 of 4	3.05	Up
Whole fly	20 ± 0	4 of 4

mushroom body defect (mud):

Annotation Number : CG12047
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002873
Gbrowse : chrX:14141875-14149287 (+) // 99.97 //
Probeset : 1624624_at
Accessions : protein= NP_536743; /// NP_727769; /// NP_727770;, nucleotide= NM_080495; /// NM_167399; /// NM_167400;
Pathway : DNA-dependent // inferred from electronic annotation /// 0006801 // superoxide metabolic process // inferred from elect
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 00
FlyMine data for FBgn0002873.
Homophila reports that CG12047 is a close match (7e-11) to human gene DSP;KPPS2;PPKS2 (NP_004406), a gene associated with Arrhythmogenic right ventricular dysplasia 8, 607450 (3);Dilated cardiomyopathy with woolly hair and keratoderma, 605676 (3);Epidermolysis bullosa, lethal acantholytic, 609638 (3);Keratosis palmoplantaris striata II (3);Skin fragility-woolly hair syndrome, 607655 (3).
BioGrid reports that CG12047 interacts with CG13138 CG4832 CG5692 .
TRiP has 3 RNAi stocks for FBgn0002873 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 1	0 of 4	0.10	Down
Head	2 ± 1	0 of 4	0.10	Down
Eye	4 ± 0	1 of 4	0.18	Down
Thoracicoabdominal ganglion	4 ± 1	1 of 4	0.20	Down
Salivary gland	10 ± 5	0 of 4	0.40	None
Crop	4 ± 1	1 of 4	0.20	Down
Midgut	2 ± 0	0 of 4	0.10	Down
Tubule	4 ± 0	0 of 4	0.20	Down
Hindgut	5 ± 1	1 of 4	0.20	Down
Heart	0 ± 0	0 of 4	0.03	Down
Fat body	11 ± 3	3 of 4	0.44	Down
Ovary	4 ± 0	3 of 4	0.20	Down
Testis	395 ± 18	4 of 4	15.40	Up
Male accessory glands	3 ± 2	0 of 4	0.10	Down
Virgin spermatheca	5 ± 1	1 of 4	0.23	Down
Mated spermatheca	11 ± 2	2 of 4	0.45	Down
Adult carcass	2 ± 0	0 of 4	0.10	Down
Larval CNS	11 ± 2	4 of 4	0.44	Down
Larval Salivary gland	1 ± 1	0 of 4	0.07	Down
Larval midgut	4 ± 1	0 of 4	0.15	Down
Larval tubule	2 ± 0	0 of 4	0.10	Down
Larval hindgut	5 ± 0	0 of 4	0.22	Down
Larval fat body	65 ± 37	3 of 4	2.50	None
Larval trachea	4 ± 1	1 of 4	0.16	Down
Larval carcass	5 ± 1	0 of 4	0.23	Down
S2 cells (growing)	34 ± 2	4 of 4	1.33	None
Whole fly	25 ± 0	4 of 4

Looking for CG12047-RC. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720