FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG12054-RA through 18771 annotations produced 1 hits

(CG12054):

Annotation Number : CG12054
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039831
Gbrowse : chr3R:27046425-27054213 (+) // 100.0 //
Probeset : 1628688_at
Accessions : protein= NP_651853; /// NP_733424;, nucleotide= NM_143596; /// NM_170545;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from p
FlyMine data for FBgn0039831.
BDGP gene expression has embryonic in situ data for CG12054: 13 pix of staining in 6 body parts.
BioGrid reports that CG12054 interacts with CG12404 .
VDRC has 3 RNAi stocks for FBgn0039831 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	371 ± 10	4 of 4	2.20	Up
Head	92 ± 5	4 of 4	0.50	Down
Eye	159 ± 12	4 of 4	0.95	None
Thoracicoabdominal ganglion	319 ± 13	4 of 4	1.90	Up
Salivary gland	68 ± 9	4 of 4	0.41	Down
Crop	110 ± 1	4 of 4	0.70	Down
Midgut	80 ± 6	4 of 4	0.50	Down
Tubule	83 ± 5	4 of 4	0.50	Down
Hindgut	104 ± 5	4 of 4	0.60	Down
Heart	104 ± 3	4 of 4	0.62	Down
Fat body	100 ± 14	4 of 4	0.60	Down
Ovary	484 ± 5	4 of 4	2.90	Up
Testis	25 ± 0	4 of 4	0.10	Down
Male accessory glands	53 ± 2	4 of 4	0.30	Down
Virgin spermatheca	89 ± 3	4 of 4	0.53	Down
Mated spermatheca	79 ± 7	4 of 4	0.47	Down
Adult carcass	58 ± 7	4 of 4	0.30	Down
Larval CNS	319 ± 10	4 of 4	1.90	Up
Larval Salivary gland	124 ± 8	4 of 4	0.74	Down
Larval midgut	80 ± 5	4 of 4	0.48	Down
Larval tubule	206 ± 20	4 of 4	1.20	None
Larval hindgut	81 ± 3	4 of 4	0.48	Down
Larval fat body	50 ± 2	4 of 4	0.30	Down
Larval trachea	99 ± 10	4 of 4	0.59	Down
Larval carcass	125 ± 3	4 of 4	0.75	Down
S2 cells (growing)	86 ± 1	4 of 4	0.52	Down
Whole fly	168 ± 12	4 of 4

Looking for CG12054-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720