Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG12063-RA through 18771 annotations produced 1 hits



morpheyus (mey):

Annotation Number : CG12063
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039851
Gbrowse : chr3R:27324594-27332720 (+) // 100.0 //
Probeset : 1624990_at
Accessions : protein= NP_651870;, nucleotide= NM_143613;
FlyMine data for FBgn0039851.
BDGP gene expression has embryonic in situ data for CG12063: 30 pix of staining in 17 body parts.
BioGrid reports that CG12063 interacts with CG7765 .
VDRC has 3 RNAi stocks for FBgn0039851 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.10None
Head2 ± 00 of 4 0.10None
Eye4 ± 11 of 4 0.27None
Thoracicoabdominal ganglion2 ± 10 of 4 0.10None
Salivary gland11 ± 30 of 4 0.71None
Crop4 ± 00 of 4 0.30None
Midgut2 ± 10 of 4 0.10None
Tubule4 ± 00 of 4 0.30Down
Hindgut8 ± 03 of 4 0.50None
Heart3 ± 10 of 4 0.20None
Fat body6 ± 21 of 4 0.39None
Ovary1 ± 00 of 4 0.10None
Testis3 ± 00 of 4 0.20None
Male accessory glands8 ± 00 of 4 0.50None
Virgin spermatheca5 ± 11 of 4 0.31None
Mated spermatheca7 ± 00 of 4 0.43None
Adult carcass8 ± 10 of 4 0.50None
Larval CNS2 ± 00 of 4 0.17None
Larval Salivary gland11 ± 12 of 4 0.69None
Larval midgut3 ± 10 of 4 0.20None
Larval tubule3 ± 10 of 4 0.20None
Larval hindgut5 ± 03 of 4 0.36None
Larval fat body5 ± 01 of 4 0.30None
Larval trachea6 ± 32 of 4 0.40None
Larval carcass18 ± 34 of 4 1.16None
S2 cells (growing)1 ± 00 of 4 0.12None
Whole fly16 ± 53 of 4

Looking for CG12063-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime