FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG12130-RA through 18771 annotations produced 1 hits

/// GA11425 (CG12130 /// DpseGA11425):

Annotation Number : CG12130
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033466
Gbrowse : chr2R:5847053-5851568 (+) // 100.0 //
Probeset : 1636841_at
Accessions : protein= NP_001137630; /// NP_610537;, nucleotide= NM_001144158; /// NM_136693;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004504 // peptidylglycine monooxygenase activity // inferred from sequence or structural similarity /// 0004504 // pept
FlyMine data for FBgn0033466.
BDGP gene expression has embryonic in situ data for CG12130: 17 pix of staining in 10 body parts.
VDRC has 3 RNAi stocks for FBgn0033466 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	39 ± 1	4 of 4	1.30	None
Head	38 ± 3	4 of 4	1.20	None
Eye	42 ± 4	4 of 4	1.37	None
Thoracicoabdominal ganglion	50 ± 3	4 of 4	1.60	Up
Salivary gland	52 ± 2	4 of 4	1.67	Up
Crop	21 ± 1	4 of 4	0.70	None
Midgut	23 ± 1	4 of 4	0.70	None
Tubule	44 ± 1	4 of 4	1.40	Up
Hindgut	25 ± 1	4 of 4	0.80	None
Heart	57 ± 7	4 of 4	1.84	Up
Fat body	77 ± 10	4 of 4	2.48	Up
Ovary	44 ± 0	4 of 4	1.40	Up
Testis	21 ± 3	4 of 4	0.70	None
Male accessory glands	118 ± 4	4 of 4	3.80	Up
Virgin spermatheca	71 ± 4	4 of 4	2.29	Up
Mated spermatheca	82 ± 6	4 of 4	2.64	Up
Adult carcass	47 ± 7	4 of 4	1.50	None
Larval CNS	47 ± 4	4 of 4	1.50	Up
Larval Salivary gland	42 ± 0	4 of 4	1.35	None
Larval midgut	41 ± 5	4 of 4	1.33	None
Larval tubule	31 ± 3	4 of 4	1.00	None
Larval hindgut	23 ± 0	4 of 4	0.76	None
Larval fat body	47 ± 5	4 of 4	1.50	Up
Larval trachea	22 ± 2	4 of 4	0.71	None
Larval carcass	13 ± 2	4 of 4	0.43	Down
S2 cells (growing)	7 ± 0	1 of 4	0.22	Down
Whole fly	31 ± 4	4 of 4

Looking for CG12130-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720