FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG12210-RB through 18771 annotations produced 3 hits

synaptobrevin (Syb):

Annotation Number : CG12210
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003660
Gbrowse : chr2R:6137992-6139914 (-) // 100.0 //
Probeset : 1635944_a_at
Accessions : protein= NP_001137633; /// NP_001137634; /// NP_523680; /// NP_724906;, nucleotide= NM_001144161; /// NM_001144162; /// NM_078956; /// NM_165756;
Pathway : open tracheal system // traceable author statement /// 0048489 // synaptic vesicle transport // non-traceable author st
Interpro : 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statemen
FlyMine data for FBgn0003660.
BioGrid reports that CG12210 interacts with CG17248 CG33101 .
TRiP has 2 RNAi stocks for FBgn0003660 available for purchase.
VDRC has 2 RNAi stocks for FBgn0003660 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	94 ± 6	4 of 4	0.30	Down
Head	290 ± 19	4 of 4	0.90	None
Eye	266 ± 10	4 of 4	0.79	Down
Thoracicoabdominal ganglion	101 ± 4	4 of 4	0.30	Down
Salivary gland	681 ± 13	4 of 4	2.03	Up
Crop	581 ± 19	4 of 4	1.70	Up
Midgut	914 ± 15	4 of 4	2.70	Up
Tubule	243 ± 17	4 of 4	0.70	Down
Hindgut	728 ± 10	4 of 4	2.20	Up
Heart	568 ± 18	4 of 4	1.69	Up
Fat body	353 ± 39	4 of 4	1.05	None
Ovary	346 ± 6	4 of 4	1.00	None
Testis	327 ± 11	4 of 4	1.00	None
Male accessory glands	643 ± 29	4 of 4	1.90	Up
Virgin spermatheca	142 ± 7	4 of 4	0.42	Down
Mated spermatheca	123 ± 7	4 of 4	0.37	Down
Adult carcass	312 ± 11	4 of 4	0.90	None
Larval CNS	269 ± 14	4 of 4	0.80	Down
Larval Salivary gland	741 ± 17	4 of 4	2.21	Up
Larval midgut	607 ± 20	4 of 4	1.81	Up
Larval tubule	955 ± 13	4 of 4	2.80	Up
Larval hindgut	590 ± 15	4 of 4	1.76	Up
Larval fat body	620 ± 48	4 of 4	1.90	Up
Larval trachea	572 ± 36	4 of 4	1.71	Up
Larval carcass	344 ± 13	4 of 4	1.03	None
S2 cells (growing)	914 ± 7	4 of 4	2.73	Up
Whole fly	335 ± 16	4 of 4

synaptobrevin (Syb):

Annotation Number : CG12210
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003660
Gbrowse : chr2R:6136981-6139914 (-) // 100.0 //
Probeset : 1637089_at
Accessions : protein= NP_001137633; /// NP_001137634; /// NP_523680; /// NP_724906;, nucleotide= NM_001144161; /// NM_001144162; /// NM_078956; /// NM_165756;
Pathway : open tracheal system // traceable author statement /// 0048489 // synaptic vesicle transport // non-traceable author st
Interpro : 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statemen
FlyMine data for FBgn0003660.
BioGrid reports that CG12210 interacts with CG17248 CG33101 .
TRiP has 2 RNAi stocks for FBgn0003660 available for purchase.
VDRC has 2 RNAi stocks for FBgn0003660 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	161 ± 4	4 of 4	0.30	Down
Head	501 ± 25	4 of 4	0.90	None
Eye	496 ± 7	4 of 4	0.91	None
Thoracicoabdominal ganglion	240 ± 10	4 of 4	0.40	Down
Salivary gland	1849 ± 102	4 of 4	3.40	Up
Crop	1100 ± 22	4 of 4	2.00	Up
Midgut	1594 ± 26	4 of 4	2.90	Up
Tubule	1825 ± 112	4 of 4	3.40	Up
Hindgut	1110 ± 22	4 of 4	2.00	Up
Heart	953 ± 26	4 of 4	1.75	Up
Fat body	881 ± 56	4 of 4	1.62	Up
Ovary	564 ± 7	4 of 4	1.00	None
Testis	639 ± 7	4 of 4	1.20	Up
Male accessory glands	1493 ± 10	4 of 4	2.70	Up
Virgin spermatheca	1299 ± 13	4 of 4	2.39	Up
Mated spermatheca	1200 ± 28	4 of 4	2.20	Up
Adult carcass	661 ± 11	4 of 4	1.20	Up
Larval CNS	564 ± 38	4 of 4	1.04	None
Larval Salivary gland	1684 ± 57	4 of 4	3.09	Up
Larval midgut	1921 ± 44	4 of 4	3.53	Up
Larval tubule	1803 ± 28	4 of 4	3.30	Up
Larval hindgut	1322 ± 18	4 of 4	2.43	Up
Larval fat body	1195 ± 75	4 of 4	2.20	Up
Larval trachea	1149 ± 86	4 of 4	2.11	Up
Larval carcass	748 ± 4	4 of 4	1.38	Up
S2 cells (growing)	1249 ± 6	4 of 4	2.30	Up
Whole fly	544 ± 26	4 of 4

synaptobrevin (Syb):

Annotation Number : CG12210
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003660
Gbrowse : chr2R:6137992-6139914 (-) // 100.0 //
Probeset : 1626835_at
Accessions : protein= NP_001137633; /// NP_001137634; /// NP_523680; /// NP_724906;, nucleotide= NM_001144161; /// NM_001144162; /// NM_078956; /// NM_165756;
Pathway : open tracheal system // traceable author statement /// 0048489 // synaptic vesicle transport // non-traceable author st
Interpro : 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statemen
FlyMine data for FBgn0003660.
BioGrid reports that CG12210 interacts with CG17248 CG33101 .
TRiP has 2 RNAi stocks for FBgn0003660 available for purchase.
VDRC has 2 RNAi stocks for FBgn0003660 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	19 ± 1	1 of 4	0.10	Down
Head	143 ± 12	4 of 4	1.00	None
Eye	97 ± 9	4 of 4	0.69	None
Thoracicoabdominal ganglion	24 ± 4	0 of 4	0.20	Down
Salivary gland	353 ± 37	4 of 4	2.48	Up
Crop	534 ± 19	4 of 4	3.80	Up
Midgut	697 ± 24	4 of 4	4.90	Up
Tubule	268 ± 25	4 of 4	1.90	Up
Hindgut	475 ± 10	4 of 4	3.30	Up
Heart	205 ± 15	4 of 4	1.44	Up
Fat body	157 ± 18	4 of 4	1.11	None
Ovary	172 ± 10	4 of 4	1.20	None
Testis	53 ± 7	4 of 4	0.40	Down
Male accessory glands	163 ± 6	4 of 4	1.20	None
Virgin spermatheca	77 ± 8	4 of 4	0.55	Down
Mated spermatheca	94 ± 9	4 of 4	0.67	None
Adult carcass	158 ± 10	4 of 4	1.10	None
Larval CNS	124 ± 14	4 of 4	0.87	None
Larval Salivary gland	221 ± 11	4 of 4	1.56	Up
Larval midgut	615 ± 16	4 of 4	4.33	Up
Larval tubule	713 ± 34	4 of 4	5.00	Up
Larval hindgut	380 ± 14	4 of 4	2.68	Up
Larval fat body	62 ± 10	4 of 4	0.40	Down
Larval trachea	454 ± 35	4 of 4	3.20	Up
Larval carcass	373 ± 18	4 of 4	2.63	Up
S2 cells (growing)	102 ± 4	4 of 4	0.72	None
Whole fly	142 ± 19	4 of 4

Looking for CG12210-RB. 3 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720