Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG12232-RA through 18771 annotations produced 1 hits



GTP-binding protein alpha-subunit (Galpha73B):

Annotation Number : CG12232
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010223
Gbrowse : chr3L:16655656-16661014 (-) // 100.0 //
Probeset : 1633439_at
Accessions : protein= NP_524118;, nucleotide= NM_079394;
Pathway : 0005834 // heterotrimeric G-protein complex // inferred from sequence or structural similarity /// 0005834 // heterotrim
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from seq
FlyMine data for FBgn0010223.
Homophila reports that CG12232 is a close match (8e-58) to human gene GNAT1 (NP_653082), a gene associated with Night blindness, congenital stationary (3).
TRiP has 1 RNAi stocks for FBgn0010223 available for purchase.
VDRC has 2 RNAi stocks for FBgn0010223 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.00Down
Head13 ± 13 of 4 0.30Down
Eye9 ± 31 of 4 0.25Down
Thoracicoabdominal ganglion2 ± 00 of 4 0.10Down
Salivary gland187 ± 104 of 4 4.77Up
Crop242 ± 154 of 4 6.20Up
Midgut424 ± 164 of 410.80Up
Tubule351 ± 474 of 4 9.00Up
Hindgut37 ± 14 of 4 0.90None
Heart7 ± 01 of 4 0.20Down
Fat body4 ± 20 of 4 0.12Down
Ovary12 ± 14 of 4 0.30Down
Testis12 ± 14 of 4 0.30Down
Male accessory glands29 ± 53 of 4 0.80None
Virgin spermatheca2266 ± 594 of 457.84Up
Mated spermatheca2169 ± 1574 of 455.38Up
Adult carcass10 ± 40 of 4 0.30Down
Larval CNS32 ± 94 of 4 0.82None
Larval Salivary gland38 ± 44 of 4 0.99None
Larval midgut351 ± 184 of 4 8.98Up
Larval tubule573 ± 284 of 414.60Up
Larval hindgut110 ± 74 of 4 2.81Up
Larval fat body9 ± 30 of 4 0.20Down
Larval trachea30 ± 74 of 4 0.78None
Larval carcass2 ± 00 of 4 0.06Down
S2 cells (growing)30 ± 24 of 4 0.77None
Whole fly39 ± 44 of 4

Looking for CG12232-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime