Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG12264-RA through 18771 annotations produced 1 hits



(CG12264):

Annotation Number : CG12264
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032393
Gbrowse : chr2L:11999653-12001244 (+) // 100.0 //
Probeset : 1640977_at
Accessions : protein= NP_609533;, nucleotide= NM_135689;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structur
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004123 // cystathionine gamma-lyase activity /
FlyMine data for FBgn0032393.
BDGP gene expression has embryonic in situ data for CG12264: 12 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0032393 available for purchase.
VDRC has 1 RNAi stocks for FBgn0032393 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain363 ± 44 of 4 1.10Up
Head387 ± 134 of 4 1.20Up
Eye333 ± 194 of 4 1.03None
Thoracicoabdominal ganglion426 ± 94 of 4 1.30Up
Salivary gland308 ± 54 of 4 0.95None
Crop493 ± 214 of 4 1.50Up
Midgut378 ± 24 of 4 1.20Up
Tubule538 ± 454 of 4 1.70Up
Hindgut429 ± 64 of 4 1.30Up
Heart426 ± 194 of 4 1.32Up
Fat body456 ± 244 of 4 1.41Up
Ovary302 ± 74 of 4 0.90None
Testis188 ± 54 of 4 0.60Down
Male accessory glands255 ± 34 of 4 0.80Down
Virgin spermatheca343 ± 144 of 4 1.06None
Mated spermatheca388 ± 224 of 4 1.20None
Adult carcass618 ± 284 of 4 1.90Up
Larval CNS232 ± 134 of 4 0.72Down
Larval Salivary gland336 ± 44 of 4 1.04Up
Larval midgut338 ± 124 of 4 1.05None
Larval tubule385 ± 164 of 4 1.20Up
Larval hindgut358 ± 64 of 4 1.11Up
Larval fat body292 ± 264 of 4 0.90None
Larval trachea221 ± 84 of 4 0.68Down
Larval carcass262 ± 154 of 4 0.81Down
S2 cells (growing)552 ± 94 of 4 1.71Up
Whole fly323 ± 24 of 4

Looking for CG12264-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime