FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG12299-RA through 18771 annotations produced 1 hits

(CG12299):

Annotation Number : CG12299
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032295
Gbrowse : chr2L:10737346-10740758 (+) // 100.0 //
Probeset : 1640042_at
Accessions : protein= NP_609448;, nucleotide= NM_135604;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from
FlyMine data for FBgn0032295.
BDGP gene expression has embryonic in situ data for CG12299: 4 pix of staining in 1 body parts.
Homophila reports that CG12299 is a close match (1e-11) to human gene BCL11A;CTIP1;EVI9;HBFQTL5;KIAA1809 (NP_075044), a gene associated with Fetal hemoglobin quantitative trait locus 5, 142335 (3).
BioGrid reports that CG12299 interacts with CG13838 CG15170 CG4835 .
TRiP has 1 RNAi stocks for FBgn0032295 available for purchase.
VDRC has 2 RNAi stocks for FBgn0032295 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	451 ± 18	4 of 4	2.70	Up
Head	131 ± 3	4 of 4	0.80	Down
Eye	170 ± 5	4 of 4	1.00	None
Thoracicoabdominal ganglion	361 ± 9	4 of 4	2.10	Up
Salivary gland	17 ± 1	1 of 4	0.10	Down
Crop	34 ± 1	4 of 4	0.20	Down
Midgut	25 ± 4	4 of 4	0.10	Down
Tubule	46 ± 3	4 of 4	0.30	Down
Hindgut	34 ± 1	4 of 4	0.20	Down
Heart	30 ± 1	4 of 4	0.18	Down
Fat body	21 ± 4	4 of 4	0.13	Down
Ovary	556 ± 4	4 of 4	3.30	Up
Testis	32 ± 1	4 of 4	0.20	Down
Male accessory glands	21 ± 3	4 of 4	0.10	Down
Virgin spermatheca	13 ± 2	4 of 4	0.08	Down
Mated spermatheca	14 ± 1	4 of 4	0.09	Down
Adult carcass	30 ± 6	3 of 4	0.20	Down
Larval CNS	758 ± 56	4 of 4	4.46	Up
Larval Salivary gland	44 ± 6	4 of 4	0.26	Down
Larval midgut	38 ± 1	4 of 4	0.23	Down
Larval tubule	58 ± 2	4 of 4	0.30	Down
Larval hindgut	57 ± 6	4 of 4	0.34	Down
Larval fat body	29 ± 1	4 of 4	0.20	Down
Larval trachea	127 ± 11	4 of 4	0.75	Down
Larval carcass	52 ± 7	4 of 4	0.31	Down
S2 cells (growing)	199 ± 11	4 of 4	1.17	None
Whole fly	170 ± 4	4 of 4

Looking for CG12299-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720