FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG12344-RA through 18771 annotations produced 1 hits

(CG12344):

Annotation Number : CG12344
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033558
Gbrowse : chr2R:6714933-6721741 (-) // 100.0 //
Probeset : 1629280_at
Accessions : protein= NP_610619;, nucleotide= NM_136775;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion cha
FlyMine data for FBgn0033558.
Homophila reports that CG12344 is a close match (5e-26) to human gene CAE2;ECA2;GABRG2;GEFSP3 (NP_944493), a gene associated with Epilepsy, childhood absence, 2, 607681 (3);Epilepsy, generalized, with febrile seizures plus, type 3, 604233 (3);Febrile convulsions, familial, 8, 611277 (3);Myoclonic epilepsy, severe, of infancy, 607208 (3).
BioGrid reports that CG12344 interacts with CG6447 CG6478 .
TRiP has 1 RNAi stocks for FBgn0033558 available for purchase.
VDRC has 2 RNAi stocks for FBgn0033558 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	55 ± 5	4 of 4	4.00	Up
Head	93 ± 9	4 of 4	6.80	Up
Eye	72 ± 9	4 of 4	5.29	Up
Thoracicoabdominal ganglion	300 ± 10	4 of 4	21.80	Up
Salivary gland	5 ± 3	0 of 4	0.38	None
Crop	6 ± 0	2 of 4	0.50	None
Midgut	2 ± 1	0 of 4	0.20	Down
Tubule	3 ± 0	0 of 4	0.20	Down
Hindgut	2 ± 1	0 of 4	0.20	Down
Heart	5 ± 1	2 of 4	0.42	None
Fat body	8 ± 2	4 of 4	0.58	None
Ovary	7 ± 0	4 of 4	0.50	None
Testis	1 ± 0	0 of 4	0.10	Down
Male accessory glands	24 ± 2	4 of 4	1.80	Up
Virgin spermatheca	3 ± 1	0 of 4	0.22	Down
Mated spermatheca	3 ± 1	0 of 4	0.27	Down
Adult carcass	42 ± 6	4 of 4	3.10	Up
Larval CNS	26 ± 5	4 of 4	1.89	Up
Larval Salivary gland	7 ± 0	3 of 4	0.51	None
Larval midgut	3 ± 1	0 of 4	0.25	Down
Larval tubule	1 ± 0	0 of 4	0.10	Down
Larval hindgut	5 ± 0	1 of 4	0.36	None
Larval fat body	3 ± 1	0 of 4	0.30	Down
Larval trachea	6 ± 3	2 of 4	0.45	None
Larval carcass	13 ± 3	4 of 4	0.97	None
S2 cells (growing)	4 ± 0	1 of 4	0.32	Down
Whole fly	13 ± 2	4 of 4

Looking for CG12344-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720