Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG12359-RA through 18771 annotations produced 1 hits



Ulp1 (Ulp1):

Annotation Number : CG12359
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027603
Gbrowse : chrX:19096671-19102217 (-) // 100.0 //
Probeset : 1639435_at
Accessions : protein= NP_573362;, nucleotide= NM_133134;
Pathway : 0005637 // nuclear inner membrane // inferred from direct assay /// 0005643 // nuclear pore // inferred from direct assa
Interpro : 0004843 // ubiquitin-specific protease activity // non-traceable author statement /// 0008233 // peptidase activity // n
FlyMine data for FBgn0027603.
BioGrid reports that CG12359 interacts with CG6866 CG7558 Dmel CG34380 .
TRiP has 1 RNAi stocks for FBgn0027603 available for purchase.
VDRC has 2 RNAi stocks for FBgn0027603 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain232 64 of 4 1.00None
Head100 64 of 4 0.40Down
Eye64 74 of 4 0.28Down
Thoracicoabdominal ganglion169 84 of 4 0.70Down
Salivary gland140 114 of 4 0.61Down
Crop131 24 of 4 0.60Down
Midgut97 44 of 4 0.40Down
Tubule64 64 of 4 0.30Down
Hindgut131 24 of 4 0.60Down
Heart49 24 of 4 0.21Down
Fat body93 104 of 4 0.41Down
Ovary417 64 of 4 1.80Up
Testis222 14 of 4 1.00None
Male accessory glands93 44 of 4 0.40Down
Virgin spermatheca57 34 of 4 0.25Down
Mated spermatheca71 24 of 4 0.31Down
Adult carcass77 54 of 4 0.30Down
Larval CNS409 274 of 4 1.77Up
Larval Salivary gland148 54 of 4 0.64Down
Larval midgut87 34 of 4 0.38Down
Larval tubule137 74 of 4 0.60Down
Larval hindgut128 24 of 4 0.55Down
Larval fat body104 94 of 4 0.50Down
Larval trachea72 64 of 4 0.31Down
Larval carcass127 54 of 4 0.55Down
S2 cells (growing)331 54 of 4 1.44Up
Whole fly230 114 of 4

Looking for CG12359-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime