FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG12428-RB through 18771 annotations produced 1 hits

(CG12428):

Annotation Number : CG12428
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039543
Gbrowse : chr3R:23529098-23532468 (-) // 100.0 //
Probeset : 1625652_s_at
Accessions : protein= NP_651583; /// NP_733230; /// NP_733231; /// NP_733232; /// NP_733233;, nucleotide= NM_143326; /// NM_170351; /// NM_170352; /// NM_170353; /// NM_170354;
Pathway : 0005777 // peroxisome // inferred from sequence or structural similarity
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008415 // acyltransferase activity // inferred fro
FlyMine data for FBgn0039543.
BDGP gene expression has embryonic in situ data for CG12428: 25 pix of staining in 6 body parts.
Homophila reports that CG12428 is a close match (2e-43) to human gene CHAT;CMS1A2 (NP_065574), a gene associated with Myasthenic syndrome, congenital, associated with episodic apnea, 254210 (3).
BioGrid reports that CG12428 interacts with CG3016 CG3529 CG14815 CG5537 CG9014 CG9083 CG9917 .
VDRC has 1 RNAi stocks for FBgn0039543 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	104 ± 2	4 of 4	0.40	Down
Head	371 ± 35	4 of 4	1.40	None
Eye	110 ± 14	4 of 4	0.42	Down
Thoracicoabdominal ganglion	97 ± 7	4 of 4	0.40	Down
Salivary gland	66 ± 6	4 of 4	0.25	Down
Crop	809 ± 25	4 of 4	3.10	Up
Midgut	530 ± 33	4 of 4	2.00	Up
Tubule	249 ± 22	4 of 4	1.00	None
Hindgut	327 ± 15	4 of 4	1.20	Up
Heart	398 ± 21	4 of 4	1.52	Up
Fat body	1244 ± 26	4 of 4	4.75	Up
Ovary	252 ± 7	4 of 4	1.00	None
Testis	25 ± 2	4 of 4	0.10	Down
Male accessory glands	41 ± 3	4 of 4	0.20	Down
Virgin spermatheca	555 ± 24	4 of 4	2.12	Up
Mated spermatheca	1068 ± 86	4 of 4	4.08	Up
Adult carcass	668 ± 12	4 of 4	2.60	Up
Larval CNS	127 ± 18	4 of 4	0.49	Down
Larval Salivary gland	50 ± 3	4 of 4	0.19	Down
Larval midgut	555 ± 71	4 of 4	2.12	Up
Larval tubule	129 ± 12	4 of 4	0.50	Down
Larval hindgut	111 ± 7	4 of 4	0.43	Down
Larval fat body	1361 ± 191	4 of 4	5.20	Up
Larval trachea	52 ± 10	4 of 4	0.20	Down
Larval carcass	72 ± 7	4 of 4	0.28	Down
S2 cells (growing)	189 ± 7	4 of 4	0.73	Down
Whole fly	261 ± 6	4 of 4

Looking for CG12428-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720