Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG12534-RA through 18771 annotations produced 1 hits



augmenter of liver regeneration (Alr):

Annotation Number : CG12534
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031068
Gbrowse : chrX:19642990-19644204 (+) // 100.0 //
Probeset : 1630885_at
Accessions : protein= NP_608353;, nucleotide= NM_134509;
Pathway : 0005739 // mitochondrion // inferred from sequence or structural similarity
Interpro : 0016971 // flavin-linked sulfhydryl oxidase activity // inferred from sequence or structural similarity /// 0016972 // t
FlyMine data for FBgn0031068.
BDGP gene expression has embryonic in situ data for CG12534: 6 pix of staining in 1 body parts.
BioGrid reports that CG12534 interacts with Dmel CG2987 CG9014 .
VDRC has 1 RNAi stocks for FBgn0031068 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain139 14 of 4 0.90None
Head100 74 of 4 0.70Down
Eye115 44 of 4 0.78Down
Thoracicoabdominal ganglion123 04 of 4 0.80Down
Salivary gland87 84 of 4 0.59Down
Crop89 44 of 4 0.60Down
Midgut95 74 of 4 0.60Down
Tubule111 144 of 4 0.80Down
Hindgut101 54 of 4 0.70Down
Heart85 34 of 4 0.57Down
Fat body99 64 of 4 0.67Down
Ovary242 64 of 4 1.60Up
Testis363 144 of 4 2.40Up
Male accessory glands74 34 of 4 0.50Down
Virgin spermatheca59 21 of 4 0.40Down
Mated spermatheca61 34 of 4 0.41Down
Adult carcass121 84 of 4 0.80None
Larval CNS143 114 of 4 0.97None
Larval Salivary gland80 24 of 4 0.54Down
Larval midgut76 44 of 4 0.51Down
Larval tubule121 84 of 4 0.80Down
Larval hindgut70 24 of 4 0.47Down
Larval fat body71 162 of 4 0.50Down
Larval trachea96 24 of 4 0.65Down
Larval carcass88 84 of 4 0.60Down
S2 cells (growing)217 44 of 4 1.46Up
Whole fly148 74 of 4

Looking for CG12534-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime