FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG1259-RB through 18771 annotations produced 1 hits

CG1259 (Cpr64Ad):

Annotation Number : CG1259
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035513
Gbrowse : chr3L:4215383-4216414 (+) // 99.58 //
Probeset : 1630307_at
Accessions : protein= NP_647875;, nucleotide= NM_139618;
Pathway : 0005811 // lipid particle // inferred from direct assay
Interpro : 0005214 // structural constituent of chitin-based cuticle // inferred from sequence or structural similarity /// 0005515
FlyMine data for FBgn0035513.
BDGP gene expression has embryonic in situ data for CG1259: 12 pix of staining in 4 body parts.
BioGrid reports that CG1259 interacts with Dmel CG34324 CG13030 CG15370 CG15771 CG3056 CG5155 CG7605 CG8965 CG9572 CG13674 CG14039 CG14044 CG14079 CG14369 CG15211 CG17666 CG17826 CG1841 CG1848 CG2174 CG31006 CG31999 CG33213 CG4027 CG4767 CG4785 CG4804 CG4818 CG6378 CG8277 CG8942 CG9893 CG31359 CG18743 CG31449 CG5834 CG6489 CG31366 CG9027 Dmel CG40368 .
VDRC has 1 RNAi stocks for FBgn0035513 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	9 ± 2	0 of 4	0.30	Down
Head	10 ± 2	0 of 4	0.40	None
Eye	5 ± 0	0 of 4	0.18	Down
Thoracicoabdominal ganglion	7 ± 3	0 of 4	0.30	Down
Salivary gland	31 ± 10	0 of 4	1.06	None
Crop	15 ± 5	0 of 4	0.50	None
Midgut	15 ± 2	0 of 4	0.50	None
Tubule	10 ± 1	0 of 4	0.40	Down
Hindgut	13 ± 5	0 of 4	0.40	None
Heart	10 ± 1	1 of 4	0.37	None
Fat body	26 ± 11	1 of 4	0.90	None
Ovary	4 ± 2	0 of 4	0.20	Down
Testis	5 ± 0	0 of 4	0.20	Down
Male accessory glands	12 ± 3	0 of 4	0.40	None
Virgin spermatheca	12 ± 4	0 of 4	0.42	None
Mated spermatheca	17 ± 3	0 of 4	0.58	None
Adult carcass	18 ± 2	0 of 4	0.60	None
Larval CNS	11 ± 5	0 of 4	0.41	None
Larval Salivary gland	19 ± 4	0 of 4	0.66	None
Larval midgut	2 ± 0	0 of 4	0.10	Down
Larval tubule	12 ± 3	0 of 4	0.40	None
Larval hindgut	10 ± 3	0 of 4	0.36	None
Larval fat body	6 ± 1	0 of 4	0.20	Down
Larval trachea	79 ± 10	4 of 4	2.72	Up
Larval carcass	8 ± 1	0 of 4	0.30	None
S2 cells (growing)	8 ± 1	0 of 4	0.30	None
Whole fly	29 ± 6	0 of 4

Looking for CG1259-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720