Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG12664-RB through 18771 annotations produced 1 hits



forked end (fend):

Annotation Number : CG12664
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030090
Gbrowse : chrX:9019164-9029051 (-) // 100.0 //
Probeset : 1625249_at
Accessions : protein= NP_572528;, nucleotide= NM_132300;
Pathway : 0005886 // plasma membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electr
FlyMine data for FBgn0030090.
BioGrid reports that CG12664 interacts with CG13598 CG4550 CG5791 CG7015 .
VDRC has 5 RNAi stocks for FBgn0030090 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain426 ± 184 of 4 6.80Up
Head62 ± 54 of 4 1.00None
Eye61 ± 34 of 4 0.98None
Thoracicoabdominal ganglion482 ± 54 of 4 7.70Up
Salivary gland10 ± 40 of 4 0.16Down
Crop5 ± 20 of 4 0.10Down
Midgut1 ± 00 of 4 0.00Down
Tubule15 ± 11 of 4 0.20Down
Hindgut5 ± 20 of 4 0.10Down
Heart63 ± 34 of 4 1.02None
Fat body30 ± 120 of 4 0.49Down
Ovary177 ± 44 of 4 2.80Up
Testis14 ± 10 of 4 0.20Down
Male accessory glands19 ± 70 of 4 0.30Down
Virgin spermatheca27 ± 41 of 4 0.43Down
Mated spermatheca29 ± 62 of 4 0.46Down
Adult carcass27 ± 70 of 4 0.40Down
Larval CNS175 ± 154 of 4 2.78Up
Larval Salivary gland4 ± 10 of 4 0.07Down
Larval midgut2 ± 10 of 4 0.04Down
Larval tubule35 ± 24 of 4 0.60Down
Larval hindgut6 ± 10 of 4 0.10Down
Larval fat body101 ± 114 of 4 1.60Up
Larval trachea41 ± 44 of 4 0.66Down
Larval carcass12 ± 20 of 4 0.21Down
S2 cells (growing)3 ± 20 of 4 0.06Down
Whole fly62 ± 44 of 4

Looking for CG12664-RB. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime