FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG12690-RA through 18771 annotations produced 2 hits

Checkpoint suppressor homologue (CHES-1-like):

Annotation Number : CG12690
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029504
Gbrowse : chrX:7578919-7590727 (-) // 100.0 //
Probeset : 1629295_at
Accessions : protein= NP_511071; /// NP_996362;, nucleotide= NM_078516; /// NM_206639;
Pathway : DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription
Interpro : DNA-dependent // inferred from electronic annotation /// 0006911 // phagocytosis
FlyMine data for FBgn0029504.
Homophila reports that CG12690 is a close match (8e-12) to human gene FKHL10;FOXI1;FREAC6 (NP_658982), a gene associated with Enlarged vestibular aqueduct, 600791 (3).
TRiP has 2 RNAi stocks for FBgn0029504 available for purchase.
VDRC has 2 RNAi stocks for FBgn0029504 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	506 ± 15	4 of 4	3.70	Up
Head	132 ± 8	4 of 4	1.00	None
Eye	379 ± 62	4 of 4	2.81	Up
Thoracicoabdominal ganglion	410 ± 21	4 of 4	3.00	Up
Salivary gland	156 ± 46	4 of 4	1.15	None
Crop	242 ± 6	4 of 4	1.80	Up
Midgut	166 ± 5	4 of 4	1.20	Up
Tubule	259 ± 11	4 of 4	1.90	Up
Hindgut	269 ± 13	4 of 4	2.00	Up
Heart	437 ± 44	4 of 4	3.23	Up
Fat body	333 ± 78	4 of 4	2.46	Up
Ovary	244 ± 4	4 of 4	1.80	Up
Testis	14 ± 2	4 of 4	0.10	Down
Male accessory glands	258 ± 10	4 of 4	1.90	Up
Virgin spermatheca	248 ± 22	4 of 4	1.84	Up
Mated spermatheca	267 ± 4	4 of 4	1.97	Up
Adult carcass	182 ± 43	4 of 4	1.40	None
Larval CNS	137 ± 26	4 of 4	1.01	None
Larval Salivary gland	170 ± 15	4 of 4	1.26	None
Larval midgut	108 ± 8	4 of 4	0.80	Down
Larval tubule	138 ± 8	4 of 4	1.00	None
Larval hindgut	214 ± 24	4 of 4	1.58	Up
Larval fat body	146 ± 10	4 of 4	1.10	None
Larval trachea	422 ± 91	4 of 4	3.12	Up
Larval carcass	136 ± 10	4 of 4	1.01	None
S2 cells (growing)	133 ± 3	4 of 4	0.99	None
Whole fly	135 ± 4	4 of 4

Checkpoint suppressor homologue (CHES-1-like):

Annotation Number : S.CX000819
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029504
Gbrowse : chrX:7583785-7584031 (-) // 93.18 //
Probeset : 1637670_s_at
Accessions : protein= NP_511071; /// NP_996362;, nucleotide= NM_078516; /// NM_206639;
Pathway : DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription
Interpro : DNA-dependent // inferred from electronic annotation /// 0006911 // phagocytosis
FlyMine data for FBgn0029504.
TRiP has 2 RNAi stocks for FBgn0029504 available for purchase.
VDRC has 2 RNAi stocks for FBgn0029504 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	10 ± 2	0 of 4	1.70	None
Head	6 ± 2	0 of 4	1.00	None
Eye	10 ± 2	1 of 4	1.71	None
Thoracicoabdominal ganglion	8 ± 2	0 of 4	1.40	None
Salivary gland	19 ± 8	0 of 4	3.18	None
Crop	10 ± 4	0 of 4	1.60	None
Midgut	3 ± 1	0 of 4	0.60	None
Tubule	2 ± 0	0 of 4	0.40	Down
Hindgut	12 ± 3	0 of 4	2.00	None
Heart	7 ± 1	0 of 4	1.25	None
Fat body	4 ± 4	0 of 4	0.76	None
Ovary	15 ± 2	0 of 4	2.50	Up
Testis	3 ± 2	0 of 4	0.50	None
Male accessory glands	10 ± 3	0 of 4	1.70	None
Virgin spermatheca	1 ± 0	0 of 4	0.27	Down
Mated spermatheca	2 ± 0	0 of 4	0.37	None
Adult carcass	20 ± 12	0 of 4	3.30	None
Larval CNS	4 ± 3	0 of 4	0.72	None
Larval Salivary gland	7 ± 1	0 of 4	1.12	None
Larval midgut	19 ± 5	0 of 4	3.04	None
Larval tubule	3 ± 0	0 of 4	0.60	None
Larval hindgut	11 ± 2	0 of 4	1.75	None
Larval fat body	6 ± 2	0 of 4	1.10	None
Larval trachea	3 ± 2	0 of 4	0.57	None
Larval carcass	4 ± 0	0 of 4	0.72	None
S2 cells (growing)	19 ± 1	0 of 4	3.06	Up
Whole fly	6 ± 1	0 of 4

Looking for CG12690-RA. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720