FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG12732-RA through 18771 annotations produced 1 hits

small conductance calcium-activated potassium channel (SK):

Annotation Number : CG12732
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029761
Gbrowse : chrX:5252360-5252741 (+) // 100.0 //
Probeset : 1624040_at
Accessions : protein= NP_001096885; /// NP_525078; /// NP_726986; /// NP_726987; /// NP_726988; /// NP_726989; /// NP_996354;, nucleotide= NM_001103415; /// NM_080339; /// NM_167029; /// NM_167030; /// NM_167031; /// NM_167032; /// NM_206631;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence
Interpro : 0005216 // ion channel activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred fro
FlyMine data for FBgn0029761.
BDGP gene expression has embryonic in situ data for SK: 4 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0029761 available for purchase.
VDRC has 7 RNAi stocks for FBgn0029761 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.90	None
Head	0 ± 0	0 of 4	1.20	None
Eye	1 ± 0	0 of 4	1.79	None
Thoracicoabdominal ganglion	0 ± 0	0 of 4	1.20	None
Salivary gland	1 ± 0	0 of 4	2.10	None
Crop	1 ± 0	0 of 4	1.40	None
Midgut	1 ± 0	0 of 4	2.00	None
Tubule	0 ± 0	0 of 4	1.10	None
Hindgut	0 ± 0	0 of 4	1.30	None
Heart	1 ± 1	0 of 4	2.38	None
Fat body	0 ± 0	0 of 4	1.07	None
Ovary	0 ± 0	0 of 4	0.70	None
Testis	1 ± 0	0 of 4	2.10	None
Male accessory glands	1 ± 0	0 of 4	2.50	None
Virgin spermatheca	1 ± 0	0 of 4	1.59	None
Mated spermatheca	0 ± 0	0 of 4	0.83	None
Adult carcass	2 ± 1	0 of 4	3.80	None
Larval CNS	0 ± 0	0 of 4	0.38	None
Larval Salivary gland	0 ± 0	0 of 4	1.07	None
Larval midgut	0 ± 0	0 of 4	0.86	None
Larval tubule	1 ± 0	0 of 4	2.60	None
Larval hindgut	0 ± 0	0 of 4	1.17	None
Larval fat body	1 ± 0	0 of 4	1.40	None
Larval trachea	0 ± 0	0 of 4	0.97	None
Larval carcass	0 ± 0	0 of 4	1.07	None
S2 cells (growing)	0 ± 0	0 of 4	0.62	None
Whole fly	0 ± 0	0 of 4

Looking for CG12732-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720