FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG12758-RB through 18771 annotations produced 2 hits

serrano (sano):

Annotation Number : S.C2R001979
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034408
Gbrowse : chr2R:14832897-14842951 (+) // 100.0 //
Probeset : 1633623_s_at
Accessions : protein= NP_001137706; /// NP_523788; /// NP_725838; /// NP_725839; /// NP_725840;, nucleotide= NM_001144234; /// NM_079064; /// NM_166314; /// NM_166315; /// NM_166316;
Pathway : open tracheal system // inferred from mutant phenotype /// 0042067 // establishment of ommatidial planar polarity // in
Interpro : 0045179 // apical cortex // inferred from direct assay
FlyMine data for FBgn0034408.
BDGP gene expression has embryonic in situ data for sano: 45 pix of staining in 10 body parts.
VDRC has 2 RNAi stocks for FBgn0034408 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	9 ± 0	0 of 4	1.80	None
Head	5 ± 2	0 of 4	1.00	None
Eye	1 ± 0	0 of 4	0.21	None
Thoracicoabdominal ganglion	8 ± 1	0 of 4	1.60	None
Salivary gland	12 ± 2	0 of 4	2.42	None
Crop	6 ± 2	0 of 4	1.30	None
Midgut	2 ± 0	0 of 4	0.50	None
Tubule	7 ± 0	0 of 4	1.50	Up
Hindgut	5 ± 1	0 of 4	1.00	None
Heart	6 ± 0	0 of 4	1.30	None
Fat body	8 ± 6	0 of 4	1.63	None
Ovary	3 ± 1	0 of 4	0.60	None
Testis	0 ± 0	0 of 4	0.20	None
Male accessory glands	7 ± 2	0 of 4	1.40	None
Virgin spermatheca	6 ± 1	0 of 4	1.34	None
Mated spermatheca	2 ± 1	0 of 4	0.57	None
Adult carcass	14 ± 3	0 of 4	2.80	Up
Larval CNS	8 ± 3	0 of 4	1.71	None
Larval Salivary gland	4 ± 2	0 of 4	0.92	None
Larval midgut	3 ± 0	0 of 4	0.62	None
Larval tubule	3 ± 1	0 of 4	0.70	None
Larval hindgut	7 ± 2	0 of 4	1.37	None
Larval fat body	1 ± 0	0 of 4	0.30	None
Larval trachea	4 ± 3	0 of 4	0.95	None
Larval carcass	4 ± 0	0 of 4	0.96	None
S2 cells (growing)	4 ± 1	0 of 4	0.96	None
Whole fly	5 ± 1	0 of 4

serrano (sano):

Annotation Number : CG12758
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034408
Gbrowse : chr2R:14765898-14846415 (+) // 100.0 //
Probeset : 1627971_s_at
Accessions : protein= NP_001137706; /// NP_523788; /// NP_725838; /// NP_725839; /// NP_725840;, nucleotide= NM_001144234; /// NM_079064; /// NM_166314; /// NM_166315; /// NM_166316;
Pathway : open tracheal system // inferred from mutant phenotype /// 0042067 // establishment of ommatidial planar polarity // in
Interpro : 0045179 // apical cortex // inferred from direct assay
FlyMine data for FBgn0034408.
BDGP gene expression has embryonic in situ data for sano: 45 pix of staining in 10 body parts.
BioGrid reports that CG12758 interacts with CG3427 .
VDRC has 2 RNAi stocks for FBgn0034408 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	101 ± 2	4 of 4	4.30	Up
Head	84 ± 7	4 of 4	3.60	Up
Eye	403 ± 38	4 of 4	17.09	Up
Thoracicoabdominal ganglion	104 ± 10	4 of 4	4.40	Up
Salivary gland	36 ± 6	4 of 4	1.54	None
Crop	39 ± 2	4 of 4	1.70	Up
Midgut	18 ± 1	4 of 4	0.80	None
Tubule	15 ± 0	3 of 4	0.70	Down
Hindgut	50 ± 2	4 of 4	2.10	Up
Heart	34 ± 2	4 of 4	1.45	Up
Fat body	34 ± 11	4 of 4	1.45	None
Ovary	8 ± 1	2 of 4	0.30	Down
Testis	21 ± 1	4 of 4	0.90	None
Male accessory glands	78 ± 5	4 of 4	3.30	Up
Virgin spermatheca	22 ± 2	4 of 4	0.97	None
Mated spermatheca	31 ± 7	4 of 4	1.32	None
Adult carcass	72 ± 6	4 of 4	3.10	Up
Larval CNS	49 ± 6	4 of 4	2.11	Up
Larval Salivary gland	17 ± 1	4 of 4	0.75	None
Larval midgut	16 ± 1	4 of 4	0.71	Down
Larval tubule	8 ± 0	2 of 4	0.30	Down
Larval hindgut	24 ± 2	4 of 4	1.02	None
Larval fat body	11 ± 2	4 of 4	0.50	Down
Larval trachea	362 ± 27	4 of 4	15.37	Up
Larval carcass	57 ± 6	4 of 4	2.45	Up
S2 cells (growing)	12 ± 1	4 of 4	0.52	Down
Whole fly	23 ± 2	4 of 4

Looking for CG12758-RB. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720