FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG12809-RA through 18771 annotations produced 1 hits

nervous fingers 2 (nerfin-2):

Annotation Number : CG12809
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041105
Gbrowse : chr3R:5896896-5899175 (+) // 100.0 //
Probeset : 1636783_at
Accessions : protein= NP_524300;, nucleotide= NM_079576;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from
FlyMine data for FBgn0041105.
TRiP has 1 RNAi stocks for FBgn0041105 available for purchase.
VDRC has 1 RNAi stocks for FBgn0041105 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	18 ± 2	4 of 4	5.90	Up
Head	6 ± 1	0 of 4	2.10	None
Eye	1 ± 0	0 of 4	0.59	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	1.50	None
Salivary gland	9 ± 0	0 of 4	2.89	Up
Crop	3 ± 1	0 of 4	1.10	None
Midgut	7 ± 0	0 of 4	2.40	Up
Tubule	5 ± 0	0 of 4	1.70	Up
Hindgut	5 ± 0	0 of 4	1.80	None
Heart	3 ± 1	0 of 4	1.13	None
Fat body	5 ± 3	0 of 4	1.63	None
Ovary	2 ± 0	0 of 4	0.90	None
Testis	4 ± 1	0 of 4	1.40	None
Male accessory glands	2 ± 1	0 of 4	0.90	None
Virgin spermatheca	2 ± 0	0 of 4	0.63	None
Mated spermatheca	1 ± 0	0 of 4	0.60	None
Adult carcass	3 ± 0	0 of 4	1.00	None
Larval CNS	16 ± 2	4 of 4	5.13	Up
Larval Salivary gland	4 ± 1	0 of 4	1.35	None
Larval midgut	10 ± 2	3 of 4	3.34	None
Larval tubule	3 ± 1	0 of 4	1.00	None
Larval hindgut	3 ± 1	0 of 4	1.18	None
Larval fat body	2 ± 0	0 of 4	0.90	None
Larval trachea	3 ± 3	0 of 4	1.27	None
Larval carcass	2 ± 0	0 of 4	0.90	None
S2 cells (growing)	20 ± 1	4 of 4	6.50	Up
Whole fly	3 ± 0	0 of 4

Looking for CG12809-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720