FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG13090-RA through 18771 annotations produced 1 hits

(CG13090):

Annotation Number : CG13090
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032054
Gbrowse : chr2L:8517445-8519180 (+) // 100.0 //
Probeset : 1635016_at
Accessions : protein= NP_609240;, nucleotide= NM_135396;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotatio
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from
FlyMine data for FBgn0032054.
BioGrid reports that CG13090 interacts with CG14806 CG1391 CG14643 CG17050 CG18012 CG2174 CG2865 CG3082 CG31626 CG3283 CG3780 CG3998 CG4035 CG4454 CG4617 CG4799 CG6376 CG7277 CG7937 CG9273 CG6447 CG6478 .
VDRC has 2 RNAi stocks for FBgn0032054 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	60 ± 2	4 of 4	0.70	Down
Head	52 ± 5	4 of 4	0.60	Down
Eye	49 ± 1	4 of 4	0.57	Down
Thoracicoabdominal ganglion	68 ± 2	4 of 4	0.80	None
Salivary gland	95 ± 11	0 of 4	1.09	None
Crop	85 ± 1	4 of 4	1.00	None
Midgut	79 ± 4	4 of 4	0.90	None
Tubule	76 ± 0	4 of 4	0.90	Down
Hindgut	82 ± 1	4 of 4	0.90	None
Heart	106 ± 6	4 of 4	1.21	None
Fat body	110 ± 9	4 of 4	1.26	Up
Ovary	137 ± 3	4 of 4	1.60	Up
Testis	145 ± 4	4 of 4	1.70	Up
Male accessory glands	78 ± 3	4 of 4	0.90	None
Virgin spermatheca	39 ± 1	4 of 4	0.45	Down
Mated spermatheca	40 ± 2	4 of 4	0.46	Down
Adult carcass	88 ± 6	4 of 4	1.00	None
Larval CNS	128 ± 16	4 of 4	1.47	Up
Larval Salivary gland	130 ± 7	4 of 4	1.49	Up
Larval midgut	52 ± 4	4 of 4	0.60	Down
Larval tubule	113 ± 5	4 of 4	1.30	Up
Larval hindgut	81 ± 1	4 of 4	0.93	None
Larval fat body	76 ± 6	4 of 4	0.90	None
Larval trachea	145 ± 15	4 of 4	1.66	Up
Larval carcass	57 ± 3	4 of 4	0.66	Down
S2 cells (growing)	158 ± 6	4 of 4	1.81	Up
Whole fly	87 ± 7	4 of 4

Looking for CG13090-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720