FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG13102-RA through 18771 annotations produced 1 hits

(CG13102):

Annotation Number : CG13102
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032088
Gbrowse : chr2L:9012192-9012892 (+) // 100.0 //
Probeset : 1639487_at
Accessions : protein= NP_609268;, nucleotide= NM_135424;
FlyMine data for FBgn0032088.
BDGP gene expression has embryonic in situ data for CG13102: 7 pix of staining in 2 body parts.
VDRC has 5 RNAi stocks for FBgn0032088 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.00	Down
Head	1 ± 0	0 of 4	0.00	Down
Eye	3 ± 1	1 of 4	0.01	Down
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.00	Down
Salivary gland	8 ± 3	0 of 4	0.03	Down
Crop	1 ± 0	0 of 4	0.00	Down
Midgut	2928 ± 121	4 of 4	11.20	Up
Tubule	317 ± 29	4 of 4	1.20	None
Hindgut	169 ± 5	4 of 4	0.60	Down
Heart	1 ± 0	0 of 4	0.00	Down
Fat body	4 ± 2	0 of 4	0.02	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	1 ± 1	0 of 4	0.00	Down
Male accessory glands	2 ± 1	0 of 4	0.00	Down
Virgin spermatheca	5 ± 0	0 of 4	0.02	Down
Mated spermatheca	4 ± 1	1 of 4	0.02	Down
Adult carcass	4 ± 2	0 of 4	0.00	Down
Larval CNS	1 ± 2	0 of 4	0.01	Down
Larval Salivary gland	1 ± 0	0 of 4	0.01	Down
Larval midgut	3123 ± 299	4 of 4	11.93	Up
Larval tubule	198 ± 29	4 of 4	0.80	None
Larval hindgut	237 ± 17	4 of 4	0.91	None
Larval fat body	2 ± 0	0 of 4	0.00	Down
Larval trachea	4 ± 3	1 of 4	0.02	Down
Larval carcass	0 ± 0	0 of 4	0.00	Down
S2 cells (growing)	1 ± 0	0 of 4	0.01	Down
Whole fly	261 ± 27	4 of 4

Looking for CG13102-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720