FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG13240-RB through 18771 annotations produced 1 hits

lethal (2) 35Di (l(2)35Di):

Annotation Number : CG13240
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001989
Gbrowse : chr2L:15750407-15751054 (-) // 100.0 //
Probeset : 1630062_a_at
Accessions : protein= NP_609765; /// NP_723927;, nucleotide= NM_135921; /// NM_165126;
Pathway : NADH to ubiquinone // inferred from sequence or structural similarity /// 0055114 // oxidation reduction // inferred fr
Interpro : 0005747 // mitochondrial respiratory chain complex I // inferred from sequence or structural similarity
FlyMine data for FBgn0001989.
VDRC has 2 RNAi stocks for FBgn0001989 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	595 ± 15	4 of 4	1.10	Up
Head	666 ± 8	4 of 4	1.30	Up
Eye	997 ± 36	4 of 4	1.91	Up
Thoracicoabdominal ganglion	770 ± 7	4 of 4	1.50	Up
Salivary gland	1235 ± 9	4 of 4	2.37	Up
Crop	540 ± 28	4 of 4	1.00	None
Midgut	667 ± 9	4 of 4	1.30	Up
Tubule	654 ± 28	4 of 4	1.30	Up
Hindgut	1047 ± 28	4 of 4	2.00	Up
Heart	705 ± 27	4 of 4	1.35	Up
Fat body	674 ± 84	4 of 4	1.29	Up
Ovary	293 ± 3	4 of 4	0.60	Down
Testis	225 ± 13	4 of 4	0.40	Down
Male accessory glands	543 ± 38	4 of 4	1.00	None
Virgin spermatheca	469 ± 27	4 of 4	0.90	None
Mated spermatheca	398 ± 11	4 of 4	0.76	Down
Adult carcass	1260 ± 72	4 of 4	2.40	Up
Larval CNS	345 ± 26	4 of 4	0.66	Down
Larval Salivary gland	629 ± 49	4 of 4	1.21	None
Larval midgut	496 ± 6	4 of 4	0.95	None
Larval tubule	542 ± 36	4 of 4	1.00	None
Larval hindgut	665 ± 20	4 of 4	1.28	Up
Larval fat body	300 ± 23	4 of 4	0.60	Down
Larval trachea	411 ± 48	4 of 4	0.79	Down
Larval carcass	575 ± 41	4 of 4	1.11	None
S2 cells (growing)	388 ± 9	4 of 4	0.75	Down
Whole fly	521 ± 22	4 of 4

Looking for CG13240-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720