FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG13281-RA through 18771 annotations produced 1 hits

CAS/CSE1 segregation protein (Cas):

Annotation Number : CG13281
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0022213
Gbrowse : chr2L:16821149-16825206 (-) // 100.0 //
Probeset : 1637053_at
Accessions : protein= NP_523588;, nucleotide= NM_078864;
Pathway : engulfment // inferred from mutant phenotype /// 0006915 // apoptosis // inferred from sequence or structural similarit
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0
FlyMine data for FBgn0022213.
BioGrid reports that CG13281 interacts with CG1609 CG15781 CG17255 CG4795 CG4799 CG6707 CG8548 Dmel CG34120 CG17757 .
TRiP has 2 RNAi stocks for FBgn0022213 available for purchase.
VDRC has 3 RNAi stocks for FBgn0022213 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	105 ± 3	4 of 4	0.20	Down
Head	108 ± 5	4 of 4	0.20	Down
Eye	94 ± 4	4 of 4	0.17	Down
Thoracicoabdominal ganglion	115 ± 2	4 of 4	0.20	Down
Salivary gland	139 ± 11	4 of 4	0.24	Down
Crop	199 ± 5	4 of 4	0.30	Down
Midgut	199 ± 3	4 of 4	0.30	Down
Tubule	203 ± 15	4 of 4	0.40	Down
Hindgut	144 ± 2	4 of 4	0.30	Down
Heart	124 ± 2	4 of 4	0.22	Down
Fat body	159 ± 7	4 of 4	0.28	Down
Ovary	1051 ± 11	4 of 4	1.80	Up
Testis	174 ± 8	4 of 4	0.30	Down
Male accessory glands	164 ± 4	4 of 4	0.30	Down
Virgin spermatheca	217 ± 17	4 of 4	0.38	Down
Mated spermatheca	228 ± 10	4 of 4	0.40	Down
Adult carcass	129 ± 1	4 of 4	0.20	Down
Larval CNS	685 ± 22	4 of 4	1.20	None
Larval Salivary gland	398 ± 15	4 of 4	0.70	Down
Larval midgut	198 ± 6	4 of 4	0.35	Down
Larval tubule	225 ± 6	4 of 4	0.40	Down
Larval hindgut	265 ± 4	4 of 4	0.47	Down
Larval fat body	175 ± 7	4 of 4	0.30	Down
Larval trachea	440 ± 49	4 of 4	0.77	Down
Larval carcass	370 ± 14	4 of 4	0.65	Down
S2 cells (growing)	667 ± 8	4 of 4	1.17	None
Whole fly	570 ± 39	4 of 4

Looking for CG13281-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720