FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG13287-RA through 18771 annotations produced 1 hits

(CG13287):

Annotation Number : CG13287
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035643
Gbrowse : chr3L:5875506-5876892 (+) // 100.0 //
Probeset : 1625662_at
Accessions : protein= NP_647994;, nucleotide= NM_139737;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from
FlyMine data for FBgn0035643.
BioGrid reports that CG13287 interacts with CG13338 CG1391 CG17009 CG17050 CG17489 CG2865 CG30404 CG30428 CG3081 CG3731 CG4237 CG4244 CG4264 CG4303 CG4617 CG4656 CG4818 CG4820 CG7041 CG7570 CG8367 CG8831 CG9277 CG9392 CG9745 CG31034 CG31362 .
VDRC has 3 RNAi stocks for FBgn0035643 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	2.40	None
Head	1 ± 0	0 of 4	0.90	None
Eye	0 ± 0	0 of 4	0.30	Down
Thoracicoabdominal ganglion	26 ± 1	4 of 4	14.10	Up
Salivary gland	1 ± 0	0 of 4	0.91	None
Crop	0 ± 0	0 of 4	0.50	None
Midgut	0 ± 0	0 of 4	0.40	None
Tubule	1 ± 0	0 of 4	0.50	Down
Hindgut	0 ± 0	0 of 4	0.50	None
Heart	0 ± 0	0 of 4	0.34	None
Fat body	0 ± 0	0 of 4	0.43	None
Ovary	0 ± 0	0 of 4	0.40	None
Testis	1 ± 0	0 of 4	0.60	None
Male accessory glands	3 ± 0	0 of 4	1.90	None
Virgin spermatheca	1 ± 0	0 of 4	0.72	None
Mated spermatheca	1 ± 0	0 of 4	0.93	None
Adult carcass	1 ± 0	0 of 4	0.70	None
Larval CNS	49 ± 6	4 of 4	26.66	Up
Larval Salivary gland	2 ± 1	0 of 4	1.20	None
Larval midgut	0 ± 0	0 of 4	0.36	None
Larval tubule	1 ± 0	0 of 4	0.60	None
Larval hindgut	1 ± 0	0 of 4	0.88	None
Larval fat body	1 ± 0	0 of 4	0.50	None
Larval trachea	0 ± 0	0 of 4	0.46	None
Larval carcass	1 ± 0	0 of 4	0.55	None
S2 cells (growing)	0 ± 0	0 of 4	0.39	None
Whole fly	1 ± 0	0 of 4

Looking for CG13287-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720