FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG13379-RA through 18771 annotations produced 1 hits

CG13379 (Sgf11):

Annotation Number : CG13379
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036804
Gbrowse : chr3L:18671930-18674788 (-) // 100.0 //
Probeset : 1636656_at
Accessions : protein= NP_001097638;, nucleotide= NM_001104168;
Pathway : DNA-dependent // inferred from mutant phenotype"
Interpro : 0000124 // SAGA complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation
FlyMine data for FBgn0036804.
BioGrid reports that CG13379 interacts with CG14612 CG13389 CG13771 CG2210 CG2865 CG3424 CG4349 CG4918 CG6519 CG7109 CG7111 CG7158 CG8495 CG9556 .
VDRC has 2 RNAi stocks for FBgn0036804 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	87 ± 3	4 of 4	0.80	None
Head	71 ± 3	4 of 4	0.70	None
Eye	102 ± 7	4 of 4	0.96	None
Thoracicoabdominal ganglion	143 ± 6	4 of 4	1.30	None
Salivary gland	58 ± 11	4 of 4	0.55	None
Crop	108 ± 8	4 of 4	1.00	None
Midgut	65 ± 2	4 of 4	0.60	None
Tubule	80 ± 5	4 of 4	0.80	Down
Hindgut	67 ± 7	4 of 4	0.60	None
Heart	76 ± 3	4 of 4	0.72	None
Fat body	87 ± 8	4 of 4	0.82	None
Ovary	184 ± 4	4 of 4	1.70	Up
Testis	88 ± 3	4 of 4	0.80	None
Male accessory glands	185 ± 13	4 of 4	1.70	Up
Virgin spermatheca	91 ± 7	4 of 4	0.86	None
Mated spermatheca	90 ± 2	4 of 4	0.85	None
Adult carcass	96 ± 8	4 of 4	0.90	None
Larval CNS	258 ± 10	4 of 4	2.42	Up
Larval Salivary gland	128 ± 4	4 of 4	1.20	None
Larval midgut	42 ± 4	4 of 4	0.40	None
Larval tubule	151 ± 1	4 of 4	1.40	None
Larval hindgut	111 ± 2	4 of 4	1.05	None
Larval fat body	68 ± 7	4 of 4	0.60	None
Larval trachea	136 ± 11	4 of 4	1.28	None
Larval carcass	91 ± 8	4 of 4	0.85	None
S2 cells (growing)	181 ± 5	4 of 4	1.70	Up
Whole fly	106 ± 22	4 of 4

Looking for CG13379-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720