FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG13388-RA through 18771 annotations produced 1 hits

A kinase anchor protein 200 (Akap200):

Annotation Number : CG13388
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027932
Gbrowse : chr2L:8415689-8430984 (+) // 100.0 //
Probeset : 1640838_s_at
Accessions : protein= NP_477459; /// NP_477460; /// NP_723395; /// NP_787998;, nucleotide= NM_058111; /// NM_058112; /// NM_164820; /// NM_175984;
Pathway : 0005811 // lipid particle // inferred from direct assay
Interpro : 0016301 // kinase activity // inferred from electronic annotation /// 0051018 // protein kinase A binding // inferred fr
FlyMine data for FBgn0027932.
BDGP gene expression has embryonic in situ data for Akap200: 10 pix of staining in 8 body parts.
BioGrid reports that CG13388 interacts with CG31958 CG4767 CG3978 CG9375 CG7524 .
TRiP has 3 RNAi stocks for FBgn0027932 available for purchase.
VDRC has 3 RNAi stocks for FBgn0027932 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	856 ± 22	4 of 4	1.00	None
Head	973 ± 53	4 of 4	1.20	None
Eye	1032 ± 66	4 of 4	1.24	Up
Thoracicoabdominal ganglion	757 ± 13	4 of 4	0.90	None
Salivary gland	443 ± 11	4 of 4	0.53	Down
Crop	368 ± 21	4 of 4	0.40	Down
Midgut	1047 ± 67	4 of 4	1.30	Up
Tubule	186 ± 28	4 of 4	0.20	Down
Hindgut	386 ± 10	4 of 4	0.50	Down
Heart	1775 ± 119	4 of 4	2.13	Up
Fat body	1872 ± 269	4 of 4	2.25	Up
Ovary	1047 ± 12	4 of 4	1.30	Up
Testis	560 ± 21	4 of 4	0.70	Down
Male accessory glands	1781 ± 66	4 of 4	2.10	Up
Virgin spermatheca	2049 ± 79	4 of 4	2.46	Up
Mated spermatheca	2084 ± 131	4 of 4	2.51	Up
Adult carcass	940 ± 72	4 of 4	1.10	None
Larval CNS	2294 ± 84	4 of 4	2.76	Up
Larval Salivary gland	1557 ± 28	4 of 4	1.87	Up
Larval midgut	1881 ± 66	4 of 4	2.26	Up
Larval tubule	1063 ± 63	4 of 4	1.30	Up
Larval hindgut	1138 ± 61	4 of 4	1.37	Up
Larval fat body	2829 ± 254	4 of 4	3.40	Up
Larval trachea	2214 ± 159	4 of 4	2.66	Up
Larval carcass	620 ± 75	4 of 4	0.75	None
S2 cells (growing)	3040 ± 61	4 of 4	3.66	Up
Whole fly	831 ± 27	4 of 4

Looking for CG13388-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720