FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG13410-RA through 18771 annotations produced 1 hits

mitochondrial ribosomal protein L35 (mRpL35):

Annotation Number : CG13410
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038923
Gbrowse : chr3R:17849265-17850069 (+) // 100.0 //
Probeset : 1627823_at
Accessions : protein= NP_651001;, nucleotide= NM_142744;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // non-traceable author sta
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structur
FlyMine data for FBgn0038923.
BioGrid reports that CG13410 interacts with CG15754 .
VDRC has 2 RNAi stocks for FBgn0038923 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	170 ± 1	4 of 4	1.10	None
Head	151 ± 9	4 of 4	1.00	None
Eye	156 ± 5	4 of 4	0.99	None
Thoracicoabdominal ganglion	154 ± 4	4 of 4	1.00	None
Salivary gland	204 ± 8	4 of 4	1.29	Up
Crop	176 ± 7	4 of 4	1.10	None
Midgut	279 ± 17	4 of 4	1.80	Up
Tubule	322 ± 10	4 of 4	2.00	Up
Hindgut	207 ± 4	4 of 4	1.30	Up
Heart	197 ± 9	4 of 4	1.24	None
Fat body	237 ± 23	4 of 4	1.50	Up
Ovary	272 ± 4	4 of 4	1.70	Up
Testis	91 ± 3	4 of 4	0.60	Down
Male accessory glands	153 ± 2	4 of 4	1.00	None
Virgin spermatheca	197 ± 11	4 of 4	1.25	None
Mated spermatheca	176 ± 5	4 of 4	1.11	None
Adult carcass	130 ± 16	4 of 4	0.80	None
Larval CNS	215 ± 10	4 of 4	1.36	Up
Larval Salivary gland	173 ± 4	4 of 4	1.09	None
Larval midgut	169 ± 9	4 of 4	1.06	None
Larval tubule	233 ± 7	4 of 4	1.50	Up
Larval hindgut	200 ± 18	4 of 4	1.26	None
Larval fat body	66 ± 2	4 of 4	0.40	Down
Larval trachea	162 ± 9	4 of 4	1.02	None
Larval carcass	164 ± 19	4 of 4	1.03	None
S2 cells (growing)	107 ± 5	4 of 4	0.68	Down
Whole fly	158 ± 12	4 of 4

Looking for CG13410-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720