FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG13493-RA through 18771 annotations produced 1 hits

cookie monster (comr):

Annotation Number : CG13493
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034667
Gbrowse : chr2R:17752371-17754364 (-) // 100.0 //
Probeset : 1636050_at
Accessions : protein= NP_611617;, nucleotide= NM_137773;
Pathway : 0000785 // chromatin // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0016563 // transcription activator activity // infe
FlyMine data for FBgn0034667.
BioGrid reports that CG13493 interacts with CG3510 Dmel CG33714 .
TRiP has 1 RNAi stocks for FBgn0034667 available for purchase.
VDRC has 2 RNAi stocks for FBgn0034667 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.40	None
Head	2 ± 0	0 of 4	0.40	None
Eye	2 ± 1	2 of 4	0.53	None
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.60	None
Salivary gland	6 ± 2	0 of 4	1.13	None
Crop	4 ± 2	0 of 4	0.80	None
Midgut	6 ± 1	0 of 4	1.10	None
Tubule	3 ± 0	0 of 4	0.50	Down
Hindgut	7 ± 1	1 of 4	1.30	None
Heart	2 ± 1	0 of 4	0.39	None
Fat body	5 ± 4	0 of 4	0.96	None
Ovary	0 ± 0	0 of 4	0.10	Down
Testis	44 ± 3	4 of 4	7.90	Up
Male accessory glands	7 ± 1	0 of 4	1.30	None
Virgin spermatheca	2 ± 1	0 of 4	0.48	None
Mated spermatheca	4 ± 1	0 of 4	0.82	None
Adult carcass	5 ± 1	0 of 4	1.00	None
Larval CNS	3 ± 3	1 of 4	0.70	None
Larval Salivary gland	1 ± 0	0 of 4	0.24	None
Larval midgut	4 ± 1	0 of 4	0.83	None
Larval tubule	4 ± 1	0 of 4	0.80	None
Larval hindgut	1 ± 0	0 of 4	0.25	None
Larval fat body	11 ± 4	1 of 4	2.00	None
Larval trachea	3 ± 3	0 of 4	0.58	None
Larval carcass	1 ± 0	0 of 4	0.28	None
S2 cells (growing)	3 ± 1	0 of 4	0.56	None
Whole fly	5 ± 1	1 of 4

Looking for CG13493-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720