FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG13503-RB through 18771 annotations produced 1 hits

solitary (Vrp1):

Annotation Number : CG13503
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0243516
Gbrowse : chr2R:17995085-18010053 (-) // 100.0 //
Probeset : 1634562_s_at
Accessions : protein= NP_001097406; /// NP_001163246; /// NP_001163247; /// NP_001163248; /// NP_001163249; /// NP_611640; /// NP_726159; /// NP_726160; /// NP_726161; /// NP_726162; /// NP_726163;, nucleotide= NM_001103936; /// NM_001169775; /// NM_001169776; /// NM_001169777; /// NM_001169778; /// NM_137796; /// NM_166507; /// NM_166508; /// NM_166509; /// NM_166510; /// NM_166511;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0032433 // filopodium tip // inferred from direct assay
Interpro : 0051015 // actin filament binding // inferred from direct assay
FlyMine data for FBgn0243516.
BioGrid reports that CG13503 interacts with CG1520 CG3727 CG4700 CG5565 .
TRiP has 2 RNAi stocks for FBgn0243516 available for purchase.
VDRC has 2 RNAi stocks for FBgn0243516 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	112 ± 4	4 of 4	0.80	Down
Head	138 ± 6	4 of 4	1.00	None
Eye	275 ± 33	4 of 4	1.90	Up
Thoracicoabdominal ganglion	164 ± 8	4 of 4	1.10	None
Salivary gland	314 ± 16	4 of 4	2.17	Up
Crop	378 ± 12	4 of 4	2.60	Up
Midgut	188 ± 6	4 of 4	1.30	Up
Tubule	91 ± 6	4 of 4	0.60	Down
Hindgut	222 ± 5	4 of 4	1.50	Up
Heart	229 ± 19	4 of 4	1.59	Up
Fat body	225 ± 43	4 of 4	1.56	Up
Ovary	363 ± 9	4 of 4	2.50	Up
Testis	68 ± 1	4 of 4	0.50	Down
Male accessory glands	135 ± 7	4 of 4	0.90	None
Virgin spermatheca	169 ± 8	4 of 4	1.17	None
Mated spermatheca	164 ± 17	4 of 4	1.13	None
Adult carcass	182 ± 8	4 of 4	1.30	Up
Larval CNS	124 ± 6	4 of 4	0.86	Down
Larval Salivary gland	268 ± 20	4 of 4	1.85	Up
Larval midgut	315 ± 50	4 of 4	2.18	Up
Larval tubule	325 ± 20	4 of 4	2.30	Up
Larval hindgut	353 ± 13	4 of 4	2.44	Up
Larval fat body	230 ± 18	4 of 4	1.60	Up
Larval trachea	699 ± 160	4 of 4	4.83	Up
Larval carcass	347 ± 27	4 of 4	2.40	Up
S2 cells (growing)	786 ± 76	4 of 4	5.43	Up
Whole fly	144 ± 5	4 of 4

Looking for CG13503-RB. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720