FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG13548-RA through 18771 annotations produced 2 hits

CG13548 (CG34371):

Annotation Number : CG30188
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085400
Gbrowse : chr2R:19051934-19060729 (-) // 100.0 //
Probeset : 1634456_at
Accessions : protein= NP_611767;, nucleotide= NM_137923;
Pathway : 0016020 // membrane // inferred from electronic annotation
FlyMine data for FBgn0085400.
Homophila reports that CG30188 is a close match (2e-16) to human gene ARMD1;FBLN6;FIBL6;HMCN1 (NP_114141), a gene associated with {Macular degeneration, age-related, 1}, 603075 (3).
VDRC has 2 RNAi stocks for FBgn0085400 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	34 ± 2	2 of 4	2.80	Up
Head	17 ± 2	0 of 4	1.40	None
Eye	10 ± 3	1 of 4	0.87	None
Thoracicoabdominal ganglion	31 ± 3	0 of 4	2.50	Up
Salivary gland	17 ± 7	0 of 4	1.38	None
Crop	15 ± 2	0 of 4	1.20	None
Midgut	8 ± 2	0 of 4	0.70	None
Tubule	4 ± 0	0 of 4	0.40	Down
Hindgut	16 ± 1	1 of 4	1.40	Up
Heart	6 ± 2	0 of 4	0.51	None
Fat body	8 ± 5	0 of 4	0.64	None
Ovary	4 ± 0	0 of 4	0.30	Down
Testis	16 ± 1	0 of 4	1.30	None
Male accessory glands	3 ± 0	0 of 4	0.30	Down
Virgin spermatheca	7 ± 2	0 of 4	0.62	None
Mated spermatheca	2 ± 0	0 of 4	0.20	Down
Adult carcass	9 ± 6	0 of 4	0.80	None
Larval CNS	21 ± 1	0 of 4	1.70	Up
Larval Salivary gland	7 ± 1	0 of 4	0.60	None
Larval midgut	9 ± 3	0 of 4	0.79	None
Larval tubule	5 ± 1	0 of 4	0.40	Down
Larval hindgut	5 ± 1	0 of 4	0.40	Down
Larval fat body	15 ± 3	0 of 4	1.30	None
Larval trachea	1 ± 0	0 of 4	0.16	Down
Larval carcass	9 ± 3	0 of 4	0.74	None
S2 cells (growing)	3 ± 1	0 of 4	0.30	Down
Whole fly	12 ± 0	0 of 4

():

Annotation Number : CG13548
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : chr2R:19063669-19064188 (-) // 100.0 //
Probeset : 1624713_at
Accessions : protein= NP_611767;, nucleotide= NM_137923;
Pathway : 0016020 // membrane // inferred from electronic annotation

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 1	0 of 4	1.20	None
Head	5 ± 1	0 of 4	0.90	None
Eye	3 ± 0	0 of 4	0.67	None
Thoracicoabdominal ganglion	6 ± 2	0 of 4	1.10	None
Salivary gland	9 ± 3	0 of 4	1.76	None
Crop	9 ± 1	0 of 4	1.80	None
Midgut	17 ± 2	0 of 4	3.00	Up
Tubule	7 ± 0	0 of 4	1.30	Up
Hindgut	4 ± 2	0 of 4	0.80	None
Heart	3 ± 1	0 of 4	0.57	None
Fat body	2 ± 0	0 of 4	0.42	None
Ovary	6 ± 1	0 of 4	1.20	None
Testis	7 ± 2	0 of 4	1.30	None
Male accessory glands	9 ± 2	0 of 4	1.70	None
Virgin spermatheca	2 ± 0	0 of 4	0.52	None
Mated spermatheca	4 ± 0	0 of 4	0.84	None
Adult carcass	4 ± 1	0 of 4	0.80	None
Larval CNS	3 ± 1	0 of 4	0.64	None
Larval Salivary gland	11 ± 5	0 of 4	2.01	None
Larval midgut	10 ± 3	0 of 4	1.79	None
Larval tubule	6 ± 2	0 of 4	1.20	None
Larval hindgut	1 ± 0	0 of 4	0.32	None
Larval fat body	3 ± 0	0 of 4	0.50	None
Larval trachea	2 ± 1	0 of 4	0.40	None
Larval carcass	2 ± 0	0 of 4	0.50	None
S2 cells (growing)	13 ± 3	0 of 4	2.32	None
Whole fly	5 ± 1	0 of 4

Looking for CG13548-RA. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720