FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG13627-RA through 18771 annotations produced 1 hits

(CG13627):

Annotation Number : CG13627
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039217
Gbrowse : chr3R:20538505-20543275 (+) // 100.0 //
Probeset : 1640771_a_at
Accessions : protein= NP_651279; /// NP_733032;, nucleotide= NM_143022; /// NM_170166;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0039217.
BDGP gene expression has embryonic in situ data for CG13627: 13 pix of staining in 5 body parts.
BioGrid reports that CG13627 interacts with CG14786 CG17018 CG17256 CG1925 CG31619 CG32062 CG4076 CG4264 CG4608 CG5140 CG6519 CG6905 CG7660 .
VDRC has 2 RNAi stocks for FBgn0039217 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.30	None
Head	2 ± 0	0 of 4	0.40	None
Eye	4 ± 1	0 of 4	0.93	None
Thoracicoabdominal ganglion	2 ± 0	0 of 4	0.40	None
Salivary gland	1 ± 0	0 of 4	0.33	None
Crop	5 ± 1	0 of 4	1.10	None
Midgut	2 ± 1	0 of 4	0.50	None
Tubule	2 ± 0	0 of 4	0.50	Down
Hindgut	2 ± 1	0 of 4	0.60	None
Heart	2 ± 0	0 of 4	0.46	None
Fat body	3 ± 2	0 of 4	0.73	None
Ovary	0 ± 0	0 of 4	0.10	None
Testis	6 ± 1	1 of 4	1.30	None
Male accessory glands	14 ± 2	0 of 4	2.90	Up
Virgin spermatheca	1 ± 0	0 of 4	0.20	None
Mated spermatheca	3 ± 1	0 of 4	0.67	None
Adult carcass	7 ± 2	0 of 4	1.50	None
Larval CNS	1 ± 0	0 of 4	0.29	None
Larval Salivary gland	4 ± 2	0 of 4	0.85	None
Larval midgut	1 ± 0	0 of 4	0.38	None
Larval tubule	2 ± 0	0 of 4	0.40	None
Larval hindgut	3 ± 1	0 of 4	0.71	None
Larval fat body	5 ± 1	0 of 4	1.20	None
Larval trachea	10 ± 6	0 of 4	2.06	None
Larval carcass	2 ± 0	0 of 4	0.41	None
S2 cells (growing)	0 ± 0	0 of 4	0.20	None
Whole fly	5 ± 2	0 of 4

Looking for CG13627-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720