FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG13641-RA through 18771 annotations produced 1 hits

(CG13641):

Annotation Number : CG13641
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039239
Gbrowse : chr3R:20689999-20690428 (-) // 100.0 //
Probeset : 1630561_at
Accessions : protein= NP_651302;, nucleotide= NM_143045;
FlyMine data for FBgn0039239.
BioGrid reports that CG13641 interacts with CG8368 .
VDRC has 2 RNAi stocks for FBgn0039239 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	7 ± 1	1 of 4	0.30	Down
Head	90 ± 21	4 of 4	3.50	None
Eye	40 ± 10	4 of 4	1.57	None
Thoracicoabdominal ganglion	7 ± 0	0 of 4	0.30	Down
Salivary gland	12 ± 5	0 of 4	0.49	None
Crop	11 ± 1	2 of 4	0.40	Down
Midgut	10 ± 1	0 of 4	0.40	Down
Tubule	8 ± 0	1 of 4	0.30	Down
Hindgut	17 ± 0	4 of 4	0.70	None
Heart	95 ± 5	4 of 4	3.73	Up
Fat body	259 ± 70	4 of 4	10.10	Up
Ovary	6 ± 0	1 of 4	0.20	Down
Testis	4 ± 0	0 of 4	0.20	Down
Male accessory glands	8 ± 1	0 of 4	0.30	Down
Virgin spermatheca	73 ± 9	4 of 4	2.84	Up
Mated spermatheca	122 ± 9	4 of 4	4.77	Up
Adult carcass	87 ± 10	4 of 4	3.40	Up
Larval CNS	5 ± 1	0 of 4	0.22	Down
Larval Salivary gland	46 ± 4	4 of 4	1.82	Up
Larval midgut	8 ± 1	0 of 4	0.32	Down
Larval tubule	15 ± 3	3 of 4	0.60	None
Larval hindgut	68 ± 10	4 of 4	2.68	Up
Larval fat body	4266 ± 473	4 of 4	165.90	Up
Larval trachea	29 ± 24	4 of 4	1.14	None
Larval carcass	25 ± 5	4 of 4	0.99	None
S2 cells (growing)	8 ± 0	3 of 4	0.33	Down
Whole fly	25 ± 4	4 of 4

Looking for CG13641-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720