FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG13646-RA through 18771 annotations produced 1 hits

(CG13646):

Annotation Number : CG13646
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039255
Gbrowse : chr3R:20773353-20775261 (+) // 100.0 //
Probeset : 1633189_at
Accessions : protein= NP_651316;, nucleotide= NM_143059;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0015171 // amino acid transmembrane transporter activity // inferred from sequence or structural similarity
FlyMine data for FBgn0039255.
VDRC has 1 RNAi stocks for FBgn0039255 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 1	0 of 4	0.90	None
Head	3 ± 2	0 of 4	1.60	None
Eye	17 ± 3	3 of 4	7.45	Up
Thoracicoabdominal ganglion	3 ± 1	0 of 4	1.50	None
Salivary gland	6 ± 2	0 of 4	2.81	None
Crop	6 ± 1	0 of 4	2.70	None
Midgut	3 ± 0	0 of 4	1.20	None
Tubule	5 ± 1	0 of 4	2.20	Up
Hindgut	3 ± 2	0 of 4	1.60	None
Heart	2 ± 1	0 of 4	0.92	None
Fat body	3 ± 2	0 of 4	1.55	None
Ovary	3 ± 1	0 of 4	1.30	None
Testis	7 ± 0	1 of 4	3.30	Up
Male accessory glands	3 ± 1	0 of 4	1.30	None
Virgin spermatheca	6 ± 2	0 of 4	2.68	None
Mated spermatheca	5 ± 2	0 of 4	2.23	None
Adult carcass	7 ± 3	0 of 4	3.20	None
Larval CNS	7 ± 2	0 of 4	3.18	Up
Larval Salivary gland	4 ± 1	0 of 4	1.69	None
Larval midgut	1 ± 0	0 of 4	0.59	None
Larval tubule	4 ± 1	0 of 4	1.90	None
Larval hindgut	3 ± 1	0 of 4	1.57	None
Larval fat body	7 ± 3	0 of 4	3.20	None
Larval trachea	2 ± 1	0 of 4	0.94	None
Larval carcass	5 ± 2	0 of 4	2.51	None
S2 cells (growing)	6 ± 2	0 of 4	2.88	None
Whole fly	2 ± 0	0 of 4

Looking for CG13646-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720