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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG13761-RB through 18771 annotations produced 1 hits



Buzidau (Bzd):

Annotation Number : CG13761
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011566
Gbrowse : chrX:2500711-2502700 (-) // 100.0 //
Probeset : 1635664_at
Accessions : protein= NP_524768;, nucleotide= NM_080029;
Interpro : 0003743 // translation initiation factor activity // non-traceable author statement /// 0008270 // zinc ion binding // i
FlyMine data for FBgn0011566.
BioGrid reports that CG13761 interacts with CG14506 CG7856 .
VDRC has 1 RNAi stocks for FBgn0011566 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain79 54 of 4 1.60Up
Head41 34 of 4 0.80None
Eye35 24 of 4 0.73None
Thoracicoabdominal ganglion72 04 of 4 1.50Up
Salivary gland39 41 of 4 0.80None
Crop41 43 of 4 0.90None
Midgut37 10 of 4 0.80None
Tubule32 22 of 4 0.70Down
Hindgut35 22 of 4 0.70None
Heart48 24 of 4 1.00None
Fat body30 60 of 4 0.62Down
Ovary84 44 of 4 1.70Up
Testis13 10 of 4 0.30Down
Male accessory glands39 21 of 4 0.80None
Virgin spermatheca15 10 of 4 0.33Down
Mated spermatheca17 30 of 4 0.37Down
Adult carcass40 20 of 4 0.80None
Larval CNS45 34 of 4 0.93None
Larval Salivary gland14 40 of 4 0.29Down
Larval midgut17 10 of 4 0.36Down
Larval tubule40 14 of 4 0.80None
Larval hindgut28 32 of 4 0.58Down
Larval fat body15 20 of 4 0.30Down
Larval trachea36 64 of 4 0.74None
Larval carcass45 20 of 4 0.93None
S2 cells (growing)49 13 of 4 1.02None
Whole fly48 44 of 4

Looking for CG13761-RB. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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