FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG13843-RA through 18771 annotations produced 1 hits

(CG13843):

Annotation Number : CG13843
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038993
Gbrowse : chr3R:18435206-18436419 (+) // 100.0 //
Probeset : 1641426_at
Accessions : protein= NP_651069;, nucleotide= NM_142812;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0038993.
BDGP gene expression has embryonic in situ data for CG13843: 4 pix of staining in 1 body parts.
BioGrid reports that CG13843 interacts with CG1622 CG33100 CG9624 CG13843 CG15218 CG15220 CG18349 CG18398 CG2865 CG32369 CG4394 CG4767 CG6519 CG6963 CG8854 CG9493 .
VDRC has 3 RNAi stocks for FBgn0038993 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.00	Down
Head	0 ± 0	0 of 4	0.00	Down
Eye	2 ± 1	0 of 4	0.05	Down
Thoracicoabdominal ganglion	2 ± 1	0 of 4	0.10	Down
Salivary gland	3 ± 2	0 of 4	0.08	Down
Crop	0 ± 0	0 of 4	0.00	Down
Midgut	0 ± 0	0 of 4	0.00	Down
Tubule	1 ± 0	0 of 4	0.00	Down
Hindgut	0 ± 0	0 of 4	0.00	Down
Heart	0 ± 0	0 of 4	0.01	Down
Fat body	1 ± 0	0 of 4	0.03	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	640 ± 23	4 of 4	13.50	Up
Male accessory glands	2 ± 1	0 of 4	0.10	Down
Virgin spermatheca	1 ± 0	0 of 4	0.04	Down
Mated spermatheca	1 ± 0	0 of 4	0.02	Down
Adult carcass	1 ± 0	0 of 4	0.00	Down
Larval CNS	0 ± 0	0 of 4	0.01	Down
Larval Salivary gland	0 ± 0	0 of 4	0.01	Down
Larval midgut	0 ± 0	0 of 4	0.01	Down
Larval tubule	0 ± 0	0 of 4	0.00	Down
Larval hindgut	0 ± 0	0 of 4	0.01	Down
Larval fat body	45 ± 28	1 of 4	1.00	None
Larval trachea	2 ± 3	0 of 4	0.05	Down
Larval carcass	0 ± 0	0 of 4	0.02	Down
S2 cells (growing)	1 ± 0	0 of 4	0.03	Down
Whole fly	47 ± 0	4 of 4

Looking for CG13843-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720