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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG1386-RA through 18771 annotations produced 1 hits



antdh (antdh):

Annotation Number : CG1386
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026268
Gbrowse : chrX:11062047-11063091 (-) // 100.0 //
Probeset : 1634831_at
Accessions : protein= NP_572695;, nucleotide= NM_132467;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004090 // carbonyl reductase (NADPH) activity
FlyMine data for FBgn0026268.
BDGP gene expression has embryonic in situ data for antdh: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0026268 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 0.10Down
Head1064 ± 1274 of 420.10Up
Eye179 ± 804 of 4 3.39None
Thoracicoabdominal ganglion2 ± 10 of 4 0.10Down
Salivary gland10 ± 20 of 4 0.20Down
Crop4 ± 20 of 4 0.10Down
Midgut1 ± 00 of 4 0.00Down
Tubule3 ± 00 of 4 0.10Down
Hindgut55 ± 14 of 4 1.00None
Heart1 ± 00 of 4 0.04Down
Fat body5 ± 30 of 4 0.10Down
Ovary1 ± 00 of 4 0.00Down
Testis0 ± 00 of 4 0.00Down
Male accessory glands1 ± 00 of 4 0.00Down
Virgin spermatheca4 ± 10 of 4 0.08Down
Mated spermatheca6 ± 10 of 4 0.12Down
Adult carcass28 ± 24 of 4 0.50Down
Larval CNS0 ± 00 of 4 0.02Down
Larval Salivary gland1 ± 00 of 4 0.02Down
Larval midgut1 ± 00 of 4 0.03Down
Larval tubule1 ± 00 of 4 0.00Down
Larval hindgut1 ± 00 of 4 0.02Down
Larval fat body2 ± 10 of 4 0.00Down
Larval trachea16 ± 132 of 4 0.31Down
Larval carcass0 ± 00 of 4 0.02Down
S2 cells (growing)2 ± 10 of 4 0.05Down
Whole fly52 ± 64 of 4

Looking for CG1386-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime