Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG13983-RA through 18771 annotations produced 1 hits



(CG13983):

Annotation Number : CG13983
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031792
Gbrowse : chr2L:6263556-6264487 (-) // 100.0 //
Probeset : 1635232_at
Accessions : protein= NP_609006;, nucleotide= NM_135162;
FlyMine data for FBgn0031792.
BDGP gene expression has embryonic in situ data for CG13983: 22 pix of staining in 3 body parts.
VDRC has 2 RNAi stocks for FBgn0031792 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain6 ± 01 of 4 1.10None
Head7 ± 00 of 4 1.40None
Eye2 ± 00 of 4 0.46None
Thoracicoabdominal ganglion6 ± 10 of 4 1.20None
Salivary gland8 ± 40 of 4 1.55None
Crop4 ± 10 of 4 0.70None
Midgut13 ± 00 of 4 2.40Up
Tubule7 ± 00 of 4 1.40Up
Hindgut8 ± 10 of 4 1.50None
Heart3 ± 21 of 4 0.71None
Fat body9 ± 10 of 4 1.73None
Ovary7 ± 11 of 4 1.30None
Testis1 ± 00 of 4 0.20None
Male accessory glands6 ± 20 of 4 1.20None
Virgin spermatheca6 ± 10 of 4 1.11None
Mated spermatheca1 ± 10 of 4 0.33None
Adult carcass9 ± 20 of 4 1.60None
Larval CNS3 ± 11 of 4 0.65None
Larval Salivary gland9 ± 00 of 4 1.62None
Larval midgut8 ± 20 of 4 1.44None
Larval tubule5 ± 00 of 4 1.10None
Larval hindgut6 ± 10 of 4 1.20None
Larval fat body1 ± 00 of 4 0.30None
Larval trachea2 ± 20 of 4 0.49None
Larval carcass2 ± 10 of 4 0.52None
S2 cells (growing)7 ± 10 of 4 1.32None
Whole fly5 ± 10 of 4

Looking for CG13983-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime