FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG13996-RA through 18771 annotations produced 1 hits

(CG13996):

Annotation Number : CG13996
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031763
Gbrowse : chr2L:6020849-6021672 (+) // 100.0 //
Probeset : 1627815_at
Accessions : protein= NP_608980;, nucleotide= NM_135136;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0031763.
BioGrid reports that CG13996 interacts with CG1799 CG6904 CG1422 CG17370 CG2189 CG3052 CG31605 CG31705 CG3510 CG4193 CG4843 CG5009 CG5108 CG6022 CG6593 CG7434 CG7889 CG9414 CG9638 CG33555 .
TRiP has 1 RNAi stocks for FBgn0031763 available for purchase.
VDRC has 2 RNAi stocks for FBgn0031763 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 1	0 of 4	9.70	Up
Head	1 ± 0	0 of 4	2.30	None
Eye	1 ± 0	0 of 4	1.78	None
Thoracicoabdominal ganglion	3 ± 1	0 of 4	5.10	None
Salivary gland	6 ± 4	0 of 4	11.43	None
Crop	0 ± 0	0 of 4	1.10	None
Midgut	5 ± 1	0 of 4	8.70	None
Tubule	2 ± 0	0 of 4	5.10	Up
Hindgut	0 ± 0	0 of 4	1.40	None
Heart	1 ± 0	0 of 4	2.48	None
Fat body	1 ± 0	0 of 4	1.70	None
Ovary	1 ± 1	0 of 4	2.90	None
Testis	1 ± 0	0 of 4	2.30	None
Male accessory glands	1 ± 0	0 of 4	1.90	None
Virgin spermatheca	2 ± 0	0 of 4	4.35	None
Mated spermatheca	1 ± 0	0 of 4	2.61	Up
Adult carcass	1 ± 0	0 of 4	2.70	None
Larval CNS	0 ± 0	0 of 4	1.65	None
Larval Salivary gland	4 ± 1	0 of 4	7.00	None
Larval midgut	1 ± 0	0 of 4	3.00	None
Larval tubule	1 ± 0	0 of 4	2.10	None
Larval hindgut	0 ± 0	0 of 4	1.13	None
Larval fat body	2 ± 1	0 of 4	4.10	None
Larval trachea	1 ± 0	0 of 4	1.83	None
Larval carcass	0 ± 0	0 of 4	1.43	None
S2 cells (growing)	0 ± 0	0 of 4	1.70	None
Whole fly	0 ± 0	0 of 4

Looking for CG13996-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720