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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG14021-RB through 18771 annotations produced 1 hits



CG14021 (fusl):

Annotation Number : CG14021
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031702
Gbrowse : chr2L:5330467-5338053 (-) // 100.0 //
Probeset : 1640365_s_at
Accessions : protein= NP_608923; /// NP_723079;, nucleotide= NM_135079; /// NM_164640;
Pathway : 0005886 // plasma membrane // inferred from direct assay /// 0042734 // presynaptic membrane // inferred from direct ass
FlyMine data for FBgn0031702.
BDGP gene expression has embryonic in situ data for CG14021: 12 pix of staining in 2 body parts.
VDRC has 2 RNAi stocks for FBgn0031702 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain147 ± 34 of 4 1.00None
Head407 ± 374 of 4 2.90Up
Eye372 ± 224 of 4 2.62Up
Thoracicoabdominal ganglion101 ± 44 of 4 0.70Down
Salivary gland12 ± 20 of 4 0.09Down
Crop15 ± 20 of 4 0.10Down
Midgut2 ± 00 of 4 0.00Down
Tubule1877 ± 1354 of 413.20Up
Hindgut204 ± 84 of 4 1.40Up
Heart276 ± 164 of 4 1.94Up
Fat body774 ± 644 of 4 5.44Up
Ovary3 ± 10 of 4 0.00Down
Testis18 ± 22 of 4 0.10Down
Male accessory glands1676 ± 1064 of 411.80Up
Virgin spermatheca723 ± 754 of 4 5.08Up
Mated spermatheca560 ± 354 of 4 3.94Up
Adult carcass447 ± 294 of 4 3.10Up
Larval CNS65 ± 54 of 4 0.46Down
Larval Salivary gland11 ± 31 of 4 0.08Down
Larval midgut674 ± 464 of 4 4.74Up
Larval tubule409 ± 294 of 4 2.90Up
Larval hindgut472 ± 324 of 4 3.32Up
Larval fat body1781 ± 1954 of 412.50Up
Larval trachea17 ± 151 of 4 0.12Down
Larval carcass17 ± 43 of 4 0.12Down
S2 cells (growing)4 ± 00 of 4 0.03Down
Whole fly142 ± 124 of 4

Looking for CG14021-RB. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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