FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG1403-RA through 18771 annotations produced 2 hits

septin (Sep-01):

Annotation Number : CG1403
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011710
Gbrowse : chrX:21229302-21232714 (+) // 100.0 //
Probeset : 1622999_at
Accessions : protein= NP_523430;, nucleotide= NM_078706;
Pathway : 0005875 // microtubule associated complex // inferred from direct assay /// 0005940 // septin ring // inferred from sequ
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable aut
FlyMine data for FBgn0011710.
BDGP gene expression has embryonic in situ data for Sep-01: 10 pix of staining in 6 body parts.
Homophila reports that CG1403 is a close match (2e-39) to human gene MSF;MSF1;NAPB;SEPT9 (NP_006631), a gene associated with Amyotrophy, hereditary neuralgic, 162100 (3);Leukemia, acute myeloid, therapy-related (1);Ovarian carcinoma (1).
BioGrid reports that CG1403 interacts with CG32654 CG4173 CG5792 CG8280 .
TRiP has 1 RNAi stocks for FBgn0011710 available for purchase.
VDRC has 2 RNAi stocks for FBgn0011710 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	197 ± 3	4 of 4	0.70	Down
Head	113 ± 3	4 of 4	0.40	Down
Eye	139 ± 7	4 of 4	0.50	Down
Thoracicoabdominal ganglion	246 ± 10	4 of 4	0.90	None
Salivary gland	307 ± 22	4 of 4	1.10	None
Crop	146 ± 3	4 of 4	0.50	Down
Midgut	83 ± 4	4 of 4	0.30	Down
Tubule	306 ± 5	4 of 4	1.10	Up
Hindgut	108 ± 2	4 of 4	0.40	Down
Heart	238 ± 5	4 of 4	0.85	Down
Fat body	98 ± 9	4 of 4	0.35	Down
Ovary	718 ± 6	4 of 4	2.60	Up
Testis	138 ± 5	4 of 4	0.50	Down
Male accessory glands	219 ± 12	4 of 4	0.80	Down
Virgin spermatheca	186 ± 11	4 of 4	0.67	Down
Mated spermatheca	183 ± 9	4 of 4	0.66	Down
Adult carcass	96 ± 6	4 of 4	0.30	Down
Larval CNS	735 ± 33	4 of 4	2.63	Up
Larval Salivary gland	351 ± 20	4 of 4	1.25	Up
Larval midgut	271 ± 21	4 of 4	0.97	None
Larval tubule	1037 ± 37	4 of 4	3.70	Up
Larval hindgut	550 ± 34	4 of 4	1.97	Up
Larval fat body	336 ± 10	4 of 4	1.20	Up
Larval trachea	538 ± 40	4 of 4	1.92	Up
Larval carcass	354 ± 29	4 of 4	1.26	None
S2 cells (growing)	890 ± 14	4 of 4	3.18	Up
Whole fly	280 ± 9	4 of 4

septin (Sep-01):

Annotation Number : CG1403
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011710
Gbrowse : chrX:21229302-21231129 (+) // 100.0 //
Probeset : 1624328_a_at
Accessions : protein= NP_523430;, nucleotide= NM_078706;
Pathway : 0005875 // microtubule associated complex // inferred from direct assay /// 0005940 // septin ring // inferred from sequ
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable aut
FlyMine data for FBgn0011710.
BDGP gene expression has embryonic in situ data for Sep-01: 10 pix of staining in 6 body parts.
Homophila reports that CG1403 is a close match (2e-39) to human gene MSF;MSF1;NAPB;SEPT9 (NP_006631), a gene associated with Amyotrophy, hereditary neuralgic, 162100 (3);Leukemia, acute myeloid, therapy-related (1);Ovarian carcinoma (1).
BioGrid reports that CG1403 interacts with CG32654 CG4173 CG5792 CG8280 .
TRiP has 1 RNAi stocks for FBgn0011710 available for purchase.
VDRC has 2 RNAi stocks for FBgn0011710 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	44 ± 0	4 of 4	0.60	Down
Head	21 ± 3	4 of 4	0.30	Down
Eye	18 ± 2	4 of 4	0.23	Down
Thoracicoabdominal ganglion	36 ± 5	4 of 4	0.50	Down
Salivary gland	49 ± 2	4 of 4	0.63	None
Crop	46 ± 5	4 of 4	0.60	None
Midgut	39 ± 3	4 of 4	0.50	Down
Tubule	14 ± 1	2 of 4	0.20	Down
Hindgut	33 ± 5	4 of 4	0.40	Down
Heart	31 ± 3	4 of 4	0.40	Down
Fat body	17 ± 6	1 of 4	0.22	Down
Ovary	151 ± 4	4 of 4	1.90	Up
Testis	34 ± 1	4 of 4	0.40	Down
Male accessory glands	62 ± 6	4 of 4	0.80	None
Virgin spermatheca	2 ± 1	0 of 4	0.04	Down
Mated spermatheca	4 ± 1	0 of 4	0.05	Down
Adult carcass	27 ± 0	3 of 4	0.30	Down
Larval CNS	111 ± 17	4 of 4	1.42	None
Larval Salivary gland	71 ± 10	4 of 4	0.90	None
Larval midgut	42 ± 3	4 of 4	0.54	None
Larval tubule	293 ± 8	4 of 4	3.70	Up
Larval hindgut	73 ± 1	4 of 4	0.94	None
Larval fat body	131 ± 8	4 of 4	1.70	Up
Larval trachea	54 ± 13	4 of 4	0.70	None
Larval carcass	56 ± 14	4 of 4	0.72	None
S2 cells (growing)	487 ± 9	4 of 4	6.20	Up
Whole fly	78 ± 11	4 of 4

Looking for CG1403-RA. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720